RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 DCDC5Q6ZRR9 648 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 Q6ZSR3 168 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 KRT74Q7RTS7 529 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 C19orf18Q8NEA5 215 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 DEFB108BQ8NET1 73 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 OR8B3Q8NGG8 313 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 HAVCR2Q8TDQ0 301 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 TFAP2CQ92754 450 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 RPL3LQ92901 407 aaKnown RBP7.73□□□□□ -1.17
NELFE-214ENST00000625905 OR8B2Q96RD0 313 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 FGF23Q9GZV9 251 aaPredicted RBP7.73□□□□□ -1.17
NELFE-214ENST00000625905 SHARPINQ9H0F6 387 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 METTL17Q9H7H0 456 aaPredicted RBP7.73□□□□□ -1.17
NELFE-214ENST00000625905 ISG20L2Q9H9L3 353 aaKnown RBP7.73□□□□□ -1.17
NELFE-214ENST00000625905 PATZ1Q9HBE1 687 aaKnown RBP7.73□□□□□ -1.17
NELFE-214ENST00000625905 TRIM36Q9NQ86 728 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 GPR173Q9NS66 373 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 HIF1ANQ9NWT6 349 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 CHCHD3Q9NX63 227 aaKnown RBP7.73□□□□□ -1.17
NELFE-214ENST00000625905 DIMT1Q9UNQ2 313 aaKnown RBP7.73□□□□□ -1.17
NELFE-214ENST00000625905 LRCH1Q9Y2L9 728 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 EXOSC1Q9Y3B2 195 aaKnown RBP7.73□□□□□ -1.17
NELFE-214ENST00000625905 VPS13CQ709C8 3753 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 MALRD1Q5VYJ5 2156 aa7.73□□□□□ -1.17
NELFE-214ENST00000625905 TRAV38-1A0A0B4J264 116 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 A0A0G2JMP0 313 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 A0A0X1KG70 313 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 EFCAB10A6NFE3 127 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 A6NIN4 97 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 TMEM212A6NML5 194 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 OR4C45A6NMZ5 311 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 ZNF732B4DXR9 585 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 F5H0A9 414 aaPredicted RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 CDIPTO14735 213 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 PLPP2O43688 288 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 GATBO75879 557 aaKnown RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 ISG15P05161 165 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 LIMS3P0CW19 117 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 LIMS4P0CW20 117 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 PIPP12273 146 aaPredicted RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 ZNF20P17024 532 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 HOXB4P17483 251 aaPredicted RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 EGR1P18146 543 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 CPT2P23786 658 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 HSPA13P48723 471 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 ETV1P50549 477 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 CCR9P51686 369 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 SEC61A1P61619 476 aaKnown RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 LCN2P80188 198 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 RIPK1Q13546 671 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 ALKBH1Q13686 389 aaKnown RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 DMRTC1Q5HYR2 192 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 FAM120AOSQ5T036 256 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 SFRP4Q6FHJ7 346 aaPredicted RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 HAGHLQ6PII5 290 aaPredicted RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 AHSA2Q719I0 299 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 EGFL6Q8IUX8 553 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 RDH10Q8IZV5 341 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 GCSAMQ8N6F7 178 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 ZNF676Q8N7Q3 588 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 SCCPDHQ8NBX0 429 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 OR4M2Q8NGB6 313 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 OR5A2Q8NGI9 324 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 OR13C3Q8NGS6 347 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 FBLIM1Q8WUP2 373 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 RNF166Q96A37 237 aaPredicted RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 C10orf35Q96D05 121 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 NEIL1Q96FI4 390 aaPredicted RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 TMEM80Q96HE8 168 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 TMEM246Q9BRR3 403 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 ZNF649Q9BS31 505 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 SSBP3Q9BWW4 388 aaPredicted RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 BEX2Q9BXY8 128 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 CHST5Q9GZS9 411 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 COMMD4Q9H0A8 199 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 TMEM165Q9HC07 324 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 CNOT2Q9NZN8 540 aaKnown RBP7.72□□□□□ -1.17
NELFE-214ENST00000625905 FRRS1LQ9P0K9 344 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 MIOXQ9UGB7 285 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 OR5V1Q9UGF6 321 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 HHLA2Q9UM44 414 aa7.72□□□□□ -1.17
NELFE-214ENST00000625905 IGHV3OR15-7A0A075B7D8 119 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 NKX6-3A6NJ46 265 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 A8MXK9 166 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 J3QT63 122 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 MYL12BO14950 172 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 PHF1O43189 567 aaPredicted RBP7.71□□□□□ -1.18
NELFE-214ENST00000625905 XPNPEP2O43895 674 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 SERPINA3P01011 423 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 RPSAP08865 295 aaKnown RBP7.71□□□□□ -1.18
NELFE-214ENST00000625905 PITPNBP48739 271 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 TGM4P49221 684 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 GMFBP60983 142 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 GNB2P62879 340 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 CNN3Q15417 329 aaKnown RBP7.71□□□□□ -1.18
NELFE-214ENST00000625905 MICBQ29980 383 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 OR2G6Q5TZ20 316 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 DCAF12L2Q5VW00 463 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 TEX36Q5VZQ5 186 aa7.71□□□□□ -1.18
NELFE-214ENST00000625905 LAIR2Q6ISS4 152 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 443.4 ms