RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
PNKP-218ENST00000625299 ZNF121P58317 390 aaPredicted RBP11.86□□□□□ -0.51
PNKP-218ENST00000625299 ERVFRD-1P60508 538 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 SLC35A2P78381 396 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 EIF2B1Q14232 305 aaKnown RBP11.86□□□□□ -0.51
PNKP-218ENST00000625299 ZNF782Q6ZMW2 699 aaPredicted RBP11.86□□□□□ -0.51
PNKP-218ENST00000625299 Q8N2B8 174 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 LINC00471Q8N535 108 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 SLC37A3Q8NCC5 494 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 PAPD5Q8NDF8 572 aaKnown RBP11.86□□□□□ -0.51
PNKP-218ENST00000625299 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 WIPF2Q8TF74 440 aaPredicted RBP11.86□□□□□ -0.51
PNKP-218ENST00000625299 PIGCQ92535 297 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 PGAM5Q96HS1 289 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 OR10A2Q9H208 303 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 YY1AP1Q9H869 796 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 SP140LQ9H930 580 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 MPC1Q9Y5U8 109 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 RHBDL1O75783 438 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 PSG2P11465 335 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 IFNGR2P38484 337 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 SMIM11AP58511 58 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 KRTAP10-11P60412 298 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 SNCBQ16143 134 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 Q6ZS46 218 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 TIGD4Q8IY51 512 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 DYNAPQ8N1N2 210 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 OR52H1Q8NGJ2 320 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 RPS4Y2Q8TD47 263 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 GNPDA2Q8TDQ7 276 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 OR5P3Q8WZ94 311 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 OCSTAMPQ9BR26 566 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 WNT10AQ9GZT5 417 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 FGF23Q9GZV9 251 aaPredicted RBP11.85□□□□□ -0.51
PNKP-218ENST00000625299 ZNF319Q9P2F9 582 aa11.85□□□□□ -0.51
PNKP-218ENST00000625299 SAMD4AQ9UPU9 718 aaKnown RBP11.85□□□□□ -0.51
PNKP-218ENST00000625299 A0A1W2PPH5 198 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 A6NDX4 124 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 HMGB1P1B2RPK0 211 aaPredicted RBP11.84□□□□□ -0.51
PNKP-218ENST00000625299 CLUP10909 449 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 CCL3L1P16619 93 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
PNKP-218ENST00000625299 GSSP48637 474 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 NUDT2P50583 147 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 GPM6AP51674 278 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 RPL31P62899 125 aaKnown RBP11.84□□□□□ -0.51
PNKP-218ENST00000625299 CRMP1Q14194 572 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 GLYATQ6IB77 296 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 CCDC121Q6ZUS5 278 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 ZDHHC23Q8IYP9 409 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 OR5AU1Q8NGC0 362 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 OR4M1Q8NGD0 313 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 OR5K1Q8NHB7 308 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 RP9Q8TA86 221 aaKnown RBP11.84□□□□□ -0.51
PNKP-218ENST00000625299 HPSE2Q8WWQ2 592 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 HIST1H2AAQ96QV6 131 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 HOPXQ9BPY8 73 aaPredicted RBP11.84□□□□□ -0.51
PNKP-218ENST00000625299 MUC13Q9H3R2 512 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 ABCB9Q9NP78 766 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 FGFR1OP2Q9NVK5 253 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 USE1Q9NZ43 259 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 ZNF222Q9UK12 451 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 PITPNC1Q9UKF7 332 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 CDH10Q9Y6N8 788 aa11.84□□□□□ -0.51
PNKP-218ENST00000625299 hCG_1809904A0A1W2PP81 198 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 A0A1W2PPE2 198 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 A0A1W2PR64 198 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 A0A1W2PRV1 198 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 VGLL3A8MV65 326 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 E9PQ18 207 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 APOC1P02654 83 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 ARG1P05089 322 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 COX4I1P13073 169 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 ACKR3P25106 362 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 BLCAPP62952 87 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 TSPAN31Q12999 210 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 SSX2Q16385 188 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 KHDC1LQ5JSQ8 128 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 PRSS45Q7RTY3 260 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 THAP5Q7Z6K1 395 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 OR6N2Q8NGY6 317 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 C1orf21Q9H246 121 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 TBC1D23Q9NUY8 699 aa11.83□□□□□ -0.52
PNKP-218ENST00000625299 DCAF13Q9NV06 445 aaKnown RBP11.83□□□□□ -0.52
PNKP-218ENST00000625299 TCRBV4S1A1TA0A5B7 111 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 F2RL2O00254 374 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 SYNGR1O43759 233 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 GMNNO75496 209 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 CST4P01036 141 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 ALDOBP05062 364 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 PIPP12273 146 aaPredicted RBP11.82□□□□□ -0.52
PNKP-218ENST00000625299 SPI1P17947 270 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 RRM2P31350 389 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 DCTDP32321 178 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 SLC25A1P53007 311 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 CD83Q01151 205 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 CEP78Q5JTW2 689 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 TEX30Q5JUR7 227 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 TMEM200BQ69YZ2 307 aa11.82□□□□□ -0.52
PNKP-218ENST00000625299 CGB2Q6NT52 195 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms