RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 CCL4P13236 92 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 DSCR4P56555 118 aaPredicted RBP11.39□□□□□ -0.59
MSH6-215ENST00000622629 IGLV3-21P80748 117 aaPredicted RBP11.39□□□□□ -0.59
MSH6-215ENST00000622629 SUMF2Q8NBJ7 301 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 FAAP24Q9BTP7 215 aa11.39□□□□□ -0.59
MSH6-215ENST00000622629 SERPINE3A8MV23 424 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 HS3ST1O14792 307 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 MSTNO14793 375 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 KCNAB3O43448 404 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 ZP3P21754 424 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 CSF2RBP32927 897 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 ZNF774Q6NX45 483 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 RAB11FIP2Q7L804 512 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 WDR5BQ86VZ2 330 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 SLC25A45Q8N413 288 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 UCN2Q96RP3 112 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 RALGAPA1Q6GYQ0 2036 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 SMCO3A2RU48 225 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 DUS4LO95620 317 aaKnown RBP11.38□□□□□ -0.59
MSH6-215ENST00000622629 IGHEP01854 428 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 TGFBR3Q03167 851 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 RAB32Q13637 225 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 FAM209AQ5JX71 171 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 Q6ZRG5 221 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 VASH2Q86V25 355 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 OR13C8Q8NGS7 320 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 TRAPPC2LQ9UL33 140 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 TMEM265A0A087WTH1 108 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 C5orf49A4QMS7 147 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 PRR32B1ATL7 298 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 THBS4P35443 961 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 C19orf57Q0VDD7 668 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 AADACL3Q5VUY0 350 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 OR5AS1Q8N127 324 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 ZFP82Q8N141 532 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 OR6X1Q8NH79 312 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 HINT2Q9BX68 163 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 BIN3Q9NQY0 253 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 GHRLQ9UBU3 117 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 WNT16Q9UBV4 365 aa11.38□□□□□ -0.59
MSH6-215ENST00000622629 J3QRE1 110 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 HSD17B6O14756 317 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 DHRS3O75911 302 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 RAC2P15153 192 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 PNLIPP16233 465 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 PDZK1IP1Q13113 114 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 PNLIPRP3Q17RR3 467 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 WDR74Q6RFH5 385 aaPredicted RBP11.37□□□□□ -0.59
MSH6-215ENST00000622629 OR1S2Q8NGQ3 325 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 FBXW5Q969U6 566 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 FOXB1Q99853 325 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 OCSTAMPQ9BR26 566 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 SLC25A31Q9H0C2 315 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 SMOC1Q9H4F8 434 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 UNKLQ9H9P5 680 aaKnown RBP11.37□□□□□ -0.59
MSH6-215ENST00000622629 KLK13Q9UKR3 277 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 A0A087WZY1 265 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 TRBV5-7A0A0A0MS05 114 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 YKT6O15498 198 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 IGKV3-11P04433 115 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 IFI6P09912 130 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 H2BFSP57053 126 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 OR5M9Q8NGP3 310 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 ASB13Q8WXK3 278 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 APC2O95996 2303 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 PLXND1Q9Y4D7 1925 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 MPDZO75970 2070 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 ZNF32P17041 273 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 BTCP35070 178 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 ECI1P42126 302 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 RPL23AP62750 156 aaKnown RBP11.37□□□□□ -0.59
MSH6-215ENST00000622629 ROM1Q03395 351 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 TUSC1Q2TAM9 212 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 C6orf15Q6UXA7 325 aaPredicted RBP11.37□□□□□ -0.59
MSH6-215ENST00000622629 NAA40Q86UY6 237 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 UBALD2Q8IYN6 164 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 SLC38A6Q8IZM9 456 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 ADAD2Q8NCV1 583 aaKnown RBP11.37□□□□□ -0.59
MSH6-215ENST00000622629 APH1AQ96BI3 265 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 ZNF768Q9H5H4 540 aaKnown RBP11.37□□□□□ -0.59
MSH6-215ENST00000622629 FBXO7Q9Y3I1 522 aa11.37□□□□□ -0.59
MSH6-215ENST00000622629 JTBO76095 146 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 LTC4SQ16873 150 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 TMEM268Q5VZI3 342 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 LINC00114Q6XXX2 140 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 TMEM104Q8NE00 496 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 CPNE4Q96A23 557 aaPredicted RBP11.36□□□□□ -0.59
MSH6-215ENST00000622629 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 SPINK2P20155 84 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 IL2RGP31785 369 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 SOHLH1Q5JUK2 328 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 BPIFCQ8NFQ6 507 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 OR9K2Q8NGE7 335 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 OR10Z1Q8NGY1 313 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 OR1F12Q8NHA8 337 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 TRAF4Q9BUZ4 470 aaPredicted RBP11.36□□□□□ -0.59
MSH6-215ENST00000622629 KCNK7Q9Y2U2 307 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 CELA2AP08217 269 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 OR13C7P0DN81 318 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms