RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 OR3A2P47893 321 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 HIST1H3AP68431 136 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 CNN3Q15417 329 aaKnown RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 CCSMST1Q4G0I0 132 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 ASPHD2Q6ICH7 369 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 TSEN15Q8WW01 171 aaKnown RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 TMEM239Q8WW34 195 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 HAS2Q92819 552 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 OR10C1Q96KK4 312 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 CIB3Q96Q77 187 aaPredicted RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 CDH20Q9HBT6 801 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 PRSS16Q9NQE7 514 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 MRPL22Q9NWU5 206 aaKnown RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 PRR13Q9NZ81 148 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 MTCH1Q9NZJ7 389 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 RNF150Q9ULK6 438 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 FCF1Q9Y324 198 aaKnown RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 RHBDD3Q9Y3P4 386 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 WSB1Q9Y6I7 421 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 HMGN2P05204 90 aaKnown RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 CEACAM1P13688 526 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 FOLR1P15328 257 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 AK4P27144 223 aaPredicted RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 IMPA1P29218 277 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 SLC25A1P53007 311 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 ID2Q02363 134 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 PMPCAQ10713 525 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 TMEM241Q24JQ0 296 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 ZNF880Q6PDB4 577 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 LRRC69Q6ZNQ3 347 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 TRAPPC6BQ86SZ2 158 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 CMTM1Q8IZ96 169 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 CYB561D1Q8N8Q1 229 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 APCDD1LQ8NCL9 501 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 KCNE4Q8WWG9 221 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 NKD1Q969G9 470 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 BPIFA2Q96DR5 249 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 MS4A6EQ96DS6 147 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 SDSLQ96GA7 329 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 FER1L6-AS2Q96M78 137 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 PCBD2Q9H0N5 130 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 SRD5A3Q9H8P0 318 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 C20orf141Q9NUB4 165 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 CLDND1Q9NY35 253 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 TRBV24-1A0A075B6N3 115 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 A0A087WV48 116 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 F6UZH7 168 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 HRKO00198 91 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SRP19P09132 144 aaKnown RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 OR5G3P0C626 314 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SLC6A6P31641 620 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 PTGER1P34995 402 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 HRH1P35367 487 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 CAPZBP47756 277 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 NCBP2P52298 156 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS11-209ENST00000622309 RND3P61587 244 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 B4GALNT1Q00973 533 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SCGB2A2Q13296 93 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 P2RY6Q15077 328 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 TAF9Q16594 264 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 TCTN1Q2MV58 587 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 LHX8Q68G74 356 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 TOMM20LQ6UXN7 152 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 TMEM182Q6ZP80 229 aaPredicted RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 KMT5CQ86Y97 462 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 COX18Q8N8Q8 333 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 CHST4Q8NCG5 386 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 NOXO1Q8NFA2 376 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 TMEM37Q8WXS4 190 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 UBE2E3Q969T4 207 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 MS4A10Q96PG2 267 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 NMNAT2Q9BZQ4 307 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 CNTD2Q9H8S5 307 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SIGLEC7Q9Y286 467 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SCN8AQ9UQD0 1980 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 HELZP42694 1942 aaKnown RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 FRMPD3Q5JV73 1810 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 M0QZ24 198 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SLC17A2O00624 439 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SLCO2B1O94956 709 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SFT2D2O95562 160 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 CHRM2P08172 466 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 HNRNPA1P09651 372 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS11-209ENST00000622309 ATP1B2P14415 290 aaPredicted RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 HNRNPA2B1P22626 353 aaKnown RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 FUT5Q11128 374 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 TMEM183BQ1AE95 376 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 ERASQ7Z444 233 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 CXorf40AQ8TE69 158 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SLC22A12Q96S37 553 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 C20orf144Q9BQM9 153 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 IKZF2Q9UKS7 526 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SLC7A11Q9UPY5 501 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 MED31Q9Y3C7 131 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 PAM16Q9Y3D7 125 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 LSM5Q9Y4Y9 91 aaKnown RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 CHD3Q12873 2000 aaKnown RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 A8MVM7 634 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms