RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SFXN5Q8TD22 340 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 C19orf60Q96EN9 201 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 GLT1D1Q96MS3 346 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 NAPGQ99747 312 aaPredicted RBP2.88□□□□□ -1.95
CPNE3-213ENST00000622183 PAIP2Q9BPZ3 127 aaKnown RBP2.88□□□□□ -1.95
CPNE3-213ENST00000622183 TIMM29Q9BSF4 260 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 NUDT9Q9BW91 350 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 STMN4Q9H169 189 aaPredicted RBP2.88□□□□□ -1.95
CPNE3-213ENST00000622183 SYT4Q9H2B2 425 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 C6orf50Q9HD87 102 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 STMN3Q9NZ72 180 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 PRO0461Q9UI25 63 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 LRRC42Q9Y546 428 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 AHDC1Q5TGY3 1603 aaPredicted RBP2.88□□□□□ -1.95
CPNE3-213ENST00000622183 JCADQ9P266 1359 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 BGNP21810 368 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 CCNOP22674 350 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 GALR1P47211 349 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 PITPNAQ00169 270 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 FBXO48Q5FWF7 155 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 FAM27D1Q5T7N8 215 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 THOC7Q6I9Y2 204 aaKnown RBP2.87□□□□□ -1.95
CPNE3-213ENST00000622183 EPGNQ6UW88 154 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 TRIML2Q8N7C3 387 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 CYB561A3Q8NBI2 242 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 OR13G1Q8NGZ3 307 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 NDNFQ8TB73 568 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 ING5Q8WYH8 240 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 SNF8Q96H20 258 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 Q96MT0 163 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 ALS2CR12Q96Q35 445 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 UTP23Q9BRU9 249 aaKnown RBP2.87□□□□□ -1.95
CPNE3-213ENST00000622183 VCX3AQ9NNX9 186 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 TMEM100Q9NV29 134 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 C21orf62Q9NYP8 219 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 CBY1Q9Y3M2 126 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 PLA2R1Q13018 1463 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 MYO10Q9HD67 2058 aa2.87□□□□□ -1.95
CPNE3-213ENST00000622183 TRAV8-7A0A075B6U6 113 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 IGHV6-1A0A0B4J1U7 121 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 TRAV8-6A0A0B4J262 113 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 CCL15-CCL14A0A0B4J2E2 113 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF850A8MQ14 1090 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 CCDC22O60826 627 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 MMP7P09237 267 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-213ENST00000622183 IFFO1Q0D2I5 559 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 MOBPQ13875 183 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 CCL15Q16663 113 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 LIN9Q5TKA1 542 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 APOBEC3HQ6NTF7 200 aaKnown RBP2.86□□□□□ -1.95
CPNE3-213ENST00000622183 UNQ9165/PRO28630Q6UXU0 137 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 IQCF2Q8IXL9 164 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 ST13P4Q8IZP2 240 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-213ENST00000622183 CA13Q8N1Q1 262 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 OR8K3Q8NH51 312 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 LRRC20Q8TCA0 184 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 TMEM159Q96B96 161 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 S100PBPQ96BU1 408 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 RAB1BQ9H0U4 201 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 TFR2Q9UP52 801 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 FARSAQ9Y285 508 aaKnown RBP2.86□□□□□ -1.95
CPNE3-213ENST00000622183 RBMX2Q9Y388 322 aaKnown RBP2.86□□□□□ -1.95
CPNE3-213ENST00000622183 PPIL1Q9Y3C6 166 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF608Q9ULD9 1512 aaPredicted RBP2.86□□□□□ -1.95
CPNE3-213ENST00000622183 PIK3R4Q99570 1358 aa2.86□□□□□ -1.95
CPNE3-213ENST00000622183 IGKV6-21A0A0C4DH24 114 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 FAM240AA0A1B0GVK7 77 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 TVP23AA6NH52 213 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 COLCA2A8K830 154 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 J3QT63 122 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 CYB5R3P00387 301 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-213ENST00000622183 PSMB5P28074 263 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 PRSS3P35030 304 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 DYNC1I2Q13409 638 aaKnown RBP2.85□□□□□ -1.95
CPNE3-213ENST00000622183 CDNFQ49AH0 187 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 FAM222AQ5U5X8 452 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 HHATQ5VTY9 493 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 OR4M2Q8NGB6 313 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 CPNE4Q96A23 557 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-213ENST00000622183 MRPL48Q96GC5 212 aaKnown RBP2.85□□□□□ -1.95
CPNE3-213ENST00000622183 LINC00477Q96M19 166 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 C20orf144Q9BQM9 153 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 CCDC94Q9BW85 323 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-213ENST00000622183 HINT2Q9BX68 163 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 COA1Q9GZY4 146 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 CSNK1G1Q9HCP0 422 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 FBXO6Q9NRD1 293 aaPredicted RBP2.85□□□□□ -1.95
CPNE3-213ENST00000622183 AGPAT3Q9NRZ7 376 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 SLC7A11Q9UPY5 501 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 ACOT9Q9Y305 439 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 S4R3C0 116 aa2.85□□□□□ -1.95
CPNE3-213ENST00000622183 TRAV40A0A0B4J280 105 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 IGHV1-3A0A0C4DH29 117 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 LOC100506127A0A0U1RQW1 187 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 CENPBD1B2RD01 187 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF879B4DU55 563 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 K7EN84 100 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 M0R1B8 84 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF593O00488 134 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-213ENST00000622183 RRP8O43159 456 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms