RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TRAV27A0A087WT01 109 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 TRBV5-7A0A0A0MS05 114 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 SYNDIG1LA6NDD5 238 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF860A6NHJ4 632 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 MASP2O00187 686 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF264O43296 627 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 KAT7O95251 611 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 CYB5R3P00387 301 aaPredicted RBP6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 IGHEP01854 428 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 HSPB1P04792 205 aaKnown RBP6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 IFNA6P05013 189 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 GYPBP06028 91 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 HNRNPA1P09651 372 aaKnown RBP eCLIP6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 RPL12P30050 165 aaKnown RBP6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 CCR5P51681 352 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 EFNB2P52799 333 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 SLC25A1P53007 311 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 ARF6P62330 175 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 FOXK1P85037 733 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 TRMT12Q53H54 448 aaKnown RBP6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 C1orf53Q5VUE5 145 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 VHLLQ6RSH7 139 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 TGIF2LYQ8IUE0 185 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 WDFY1Q8IWB7 410 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 TMEFF1Q8IYR6 380 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 RAB42Q8N4Z0 105 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 C10orf53Q8N6V4 93 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 TMEM104Q8NE00 496 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 CCDC74BQ96LY2 380 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 CNTD2Q9H8S5 307 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 GPR35Q9HC97 309 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 SLC2A4RGQ9NR83 387 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 THAP10Q9P2Z0 257 aaPredicted RBP6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 CYP8B1Q9UNU6 501 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 MRPS2Q9Y399 296 aaKnown RBP6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 TMED7Q9Y3B3 224 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 ZNF780BQ9Y6R6 833 aa6.65□□□□□ -1.34
TRIM49B-202ENST00000622138 C2orf16Q68DN1 1984 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 LOC105371242A0A075B767 164 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 OR4C45A6NMZ5 311 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 SLC17A2O00624 439 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 SCGB1D1O95968 90 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 ERCC1P07992 297 aaPredicted RBP6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 FUT3P21217 361 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 FCGR2CP31995 323 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 PSMB10P40306 273 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 LSSP48449 732 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 HIST1H3AP68431 136 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 COL10A1Q03692 680 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 IL15RAQ13261 267 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 RAB32Q13637 225 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 OR1Q1Q15612 314 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 CST6Q15828 149 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 RAB11BQ15907 218 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 TMEM183BQ1AE95 376 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 TRIM61Q5EBN2 209 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 EXOSC6Q5RKV6 272 aaKnown RBP6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 MRPL2Q5T653 305 aaKnown RBP6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 ZAR1Q86SH2 424 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 H1FOOQ8IZA3 346 aaPredicted RBP6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 ZNF619Q8N2I2 560 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 LRRC25Q8N386 305 aaPredicted RBP6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 OR51D1Q8NGF3 324 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 OR10G4Q8NGN3 311 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 OR2V1Q8NHB1 315 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 MRGPRFQ96AM1 343 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 SDF2Q99470 211 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 TIMM29Q9BSF4 260 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 CTDSP1Q9GZU7 261 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 FGF22Q9HCT0 170 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 KIAA1456Q9P272 454 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 B3GAT1Q9P2W7 334 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 SLC7A11Q9UPY5 501 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 TICRRQ7Z2Z1 1910 aa6.65□□□□□ -1.35
TRIM49B-202ENST00000622138 A0A087WV62 115 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 H0YL77 283 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 SFT2D2O95562 160 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 MBPP02686 304 aaPredicted RBP6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 NBEAP1P0C6P0 100 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 GIMD1P0DJR0 217 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 ZNF28P17035 718 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 RPS4Y1P22090 263 aaKnown RBP6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 PBX2P40425 430 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 P2RY1P47900 373 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 VAMP2P63027 116 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 HLA-DRB3P79483 266 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 TAF9Q16594 264 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 HYAL4Q2M3T9 481 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 ACOT6Q3I5F7 207 aaPredicted RBP6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 ARHGAP11BQ3KRB8 267 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 DEFB134Q4QY38 66 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 TMEM128Q5BJH2 165 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 FHL5Q5TD97 284 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 TEX43Q6ZNM6 134 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 PRSS41Q7RTY9 318 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 FAM219AQ8IW50 185 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 ZNF679Q8IYX0 411 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 LYG1Q8N1E2 194 aa6.64□□□□□ -1.35
TRIM49B-202ENST00000622138 TMEM52Q8NDY8 209 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms