RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MEIS3P1A6NDR6 274 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 SULT1C2O00338 296 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 CHRM2P08172 466 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 SERPINA2P20848 420 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 BTCP35070 178 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 ZP1P60852 638 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 FTMTQ8N4E7 242 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 OR10K1Q8NGX5 313 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 OR10R2Q8NGX6 335 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 NICN1Q9BSH3 213 aa18.5■□□□□ 0.55
SPAST-204ENST00000621856 IGF2RP11717 2491 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 IGKV1-27A0A075B6S5 117 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 J3QW42 95 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 PLATP00750 562 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 IL32P24001 234 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 PRDX4Q13162 271 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 PCGF3Q3KNV8 242 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 ZNF554Q86TJ5 538 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 SCPEP1Q9HB40 452 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 HRASLSQ9HDD0 168 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 OBP2BQ9NPH6 170 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 LAMA5O15230 3695 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 TMEM235A6NFC5 223 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 CD300LBA8K4G0 201 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 SMPD2O60906 423 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 LPLP06858 475 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 ZNF260Q3ZCT1 412 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 CDNFQ49AH0 187 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 PLA1AQ53H76 456 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 SPATA46Q5T0L3 261 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 Q6ZTK2 550 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 ZDHHC23Q8IYP9 409 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 OR51T1Q8NGJ9 327 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 GPX8Q8TED1 209 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 ZCCHC14Q8WYQ9 949 aaKnown RBP18.49■□□□□ 0.55
SPAST-204ENST00000621856 PPP1R14BQ96C90 147 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 WBP1Q96G27 269 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 NUDT16L1Q9BRJ7 211 aaKnown RBP18.49■□□□□ 0.55
SPAST-204ENST00000621856 METTL9Q9H1A3 318 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 TAS2R8Q9NYW2 309 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 AMDHD2Q9Y303 409 aa18.49■□□□□ 0.55
SPAST-204ENST00000621856 BOD1L1Q8NFC6 3051 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 A0A0A6YYD4 124 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 NAP1L6A6NFF2 107 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 OR5H1A6NKK0 313 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 SPRY1O43609 319 aaPredicted RBP18.48■□□□□ 0.55
SPAST-204ENST00000621856 CST4P01036 141 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 CSF1P09603 554 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 MGMTP16455 207 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 GIFP27352 417 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 PPP1CBP62140 327 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 RBPJQ06330 500 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 ZNF474Q6S9Z5 364 aaPredicted RBP18.48■□□□□ 0.55
SPAST-204ENST00000621856 UNQ6494/PRO21346Q6UXR6 183 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 CDH24Q86UP0 819 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 OR56B1Q8NGI3 324 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 AQP3Q92482 292 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 UPRTQ96BW1 309 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 SEH1LQ96EE3 360 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 CACNG6Q9BXT2 260 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 SELENOIQ9C0D9 397 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 SH3BGRL2Q9UJC5 107 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 TINAGQ9UJW2 476 aa18.48■□□□□ 0.55
SPAST-204ENST00000621856 ANKRD30BLA7E2S9 258 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 ANGPTL7O43827 346 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 IGKV3-15P01624 115 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 ACTBP60709 375 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 RPS27AP62979 156 aaKnown RBP18.47■□□□□ 0.55
SPAST-204ENST00000621856 ACTG1P63261 375 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 SSBP1Q04837 148 aaKnown RBP18.47■□□□□ 0.55
SPAST-204ENST00000621856 RSU1Q15404 277 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 BHLHE23Q8NDY6 225 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 STEAP2Q8NFT2 490 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 CREB3L1Q96BA8 519 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 CCDC120Q96HB5 630 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 NEURL2Q9BR09 285 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 CRIM1Q9NZV1 1036 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 ELF5Q9UKW6 265 aaPredicted RBP18.47■□□□□ 0.55
SPAST-204ENST00000621856 ZNF835Q9Y2P0 537 aa18.47■□□□□ 0.55
SPAST-204ENST00000621856 WIPF3A6NGB9 483 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 SOCS1O15524 211 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 HTR3BO95264 441 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 HNRNPCP07910 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
SPAST-204ENST00000621856 GTF2F2P13984 249 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 GNB3P16520 340 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 OPRM1P35372 400 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 FAUP35544 74 aaKnown RBP18.46■□□□□ 0.55
SPAST-204ENST00000621856 CCR6P51684 374 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 OLFML2AQ68BL7 652 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 RAB3CQ96E17 227 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 HIST1H2AAQ96QV6 131 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 MARVELD1Q9BSK0 173 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 ZGRF1Q86YA3 2104 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 INMT-MINDY4F8WBC2 141 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 CSTBP04080 98 aaKnown RBP18.46■□□□□ 0.55
SPAST-204ENST00000621856 FCER2P06734 321 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 AGAP6Q5VW22 663 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 SFRP4Q6FHJ7 346 aaPredicted RBP18.46■□□□□ 0.55
SPAST-204ENST00000621856 OR2T2Q6IF00 324 aa18.46■□□□□ 0.55
SPAST-204ENST00000621856 MCUBQ9NWR8 336 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms