RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 UCK1Q9HA47 277 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF225Q9UK10 706 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 TMEM235A6NFC5 223 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 AKR7A2O43488 359 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 OR7C2O60412 319 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 NHLRC1Q6VVB1 395 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 SFTPA2Q8IWL1 248 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 MFSD4AQ8N468 514 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 PLA2G12AQ9BZM1 189 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 CXXC4Q9H2H0 198 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 PIGMQ9H3S5 423 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 HEXA-AS1Q9H8Q6 139 aa8.75□□□□□ -1.01
CLTCL1-211ENST00000621271 OR2M5A3KFT3 312 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SDCBPO00560 298 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SIX6O95475 246 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 HRASP01112 189 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SMIM17P0DL12 118 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 EPHA2P29317 976 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 HOXC8P31273 242 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 PRICKLE4Q2TBC4 344 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 TOR2AQ5JU69 321 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 OR51S1Q8NGJ8 323 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 PTPMT1Q8WUK0 201 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 EXTL1Q92935 676 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 PRDM6Q9NQX0 595 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 NTMQ9P121 344 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 ASCC3Q8N3C0 2202 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 C20orf202A1L168 122 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 ARRDC5A6NEK1 342 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 TMEM200CA6NKL6 621 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 COX7A2P2O60397 106 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 RBP4P02753 201 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SP1P08047 785 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 GABRB1P18505 474 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 FUT3P21217 361 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 RPS10P46783 165 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 RAB7AP51149 207 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 GAB4Q2WGN9 574 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 TMEM268Q5VZI3 342 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF439Q8NDP4 499 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 C20orf24Q9BUV8 137 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 MS4A7Q9GZW8 240 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 EXOSC3Q9NQT5 275 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 PURGQ9UJV8 347 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 CEP290O15078 2479 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 A0A1B0GTH9 108 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 RAB19A4D1S5 217 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 HYAL3O43820 417 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 PEX11BO96011 259 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 IGFBP1P08833 259 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 FOSL1P15407 271 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 NME2P22392 152 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 S100A4P26447 101 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 NDUFA6P56556 154 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 STARD6P59095 220 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SKP2Q13309 424 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 EXOSC2Q13868 293 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SIGIRRQ6IA17 410 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 MOB1BQ7L9L4 216 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 ARHGEF39Q8N4T4 335 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 ACY3Q96HD9 319 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SOX7Q9BT81 388 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 C1RLQ9NZP8 487 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 TMEFF2Q9UIK5 374 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 COL4A5P29400 1685 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF816Q0VGE8 651 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 TIGITQ495A1 244 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 C1orf185Q5T7R7 199 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SLC16A12Q6ZSM3 486 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 TIPARPQ7Z3E1 657 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 OR6S1Q8NH40 331 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 MCHR2Q969V1 340 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 LPAR2Q9HBW0 351 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 SLC25A19Q9HC21 320 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF835Q9Y2P0 537 aa8.74□□□□□ -1.01
CLTCL1-211ENST00000621271 FAM157AC9JC47 383 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 TMPRSS2O15393 492 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 C1QAP02745 245 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 DHODHQ02127 395 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF574Q6ZN55 896 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 TMPRSS11FQ6ZWK6 438 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 VN1R4Q7Z5H5 301 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 SPRED2Q7Z698 418 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 TUSC5Q8IXB3 177 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 OR2G2Q8NGZ5 317 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 SMIM19Q96E16 107 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 C4orf45Q96LM5 186 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 NKX6-2Q9C056 277 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 PLAC1Q9HBJ0 212 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 DDX60LQ5H9U9 1706 aaKnown RBP8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 A0A0B4J2E0 115 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 A0A1B0GX12 115 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 MAGEB4O15481 346 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 ADRB1P08588 477 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 PRR35P0CG20 571 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 GPR6P46095 362 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 DMRTC1Q5HYR2 192 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 ZBTB37Q5TC79 503 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 OR2M7Q8NG81 312 aa8.73□□□□□ -1.01
CLTCL1-211ENST00000621271 POFUT1Q9H488 388 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms