RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 UPRTQ96BW1 309 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 RNF170Q96K19 258 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 CEP19Q96LK0 163 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 KCTD7Q96MP8 289 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 OR2V2Q96R30 315 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 WNT5BQ9H1J7 359 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 MEPEQ9NQ76 525 aaPredicted RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 IL19Q9UHD0 177 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 TIMM10BQ9Y5J6 103 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 IGKV1D-43A0A0B4J1Z2 117 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 A0A0B4J293 547 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 IGHV2-70DA0A0C4DH43 119 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 A0A1W2PQL4 384 aaPredicted RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 HMX3A6NHT5 357 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 F5H0A9 414 aaPredicted RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 ICMTO60725 284 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 CCNKO75909 580 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 ZNF205O95201 554 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 OR5F1O95221 314 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 FUT1P19526 365 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 LAP3P28838 519 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 RCVRNP35243 200 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 IFNGR2P38484 337 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 ZNF133P52736 654 aaPredicted RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 DEFB112Q30KQ8 113 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 ARMC4Q5T2S8 1044 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 GPR157Q5UAW9 335 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 OLFML2AQ68BL7 652 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 ZNF774Q6NX45 483 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 ZNF620Q6ZNG0 422 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 MBOAT2Q6ZWT7 520 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 NLRC3Q7RTR2 1065 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 OR8H2Q8N162 312 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 OR10S1Q8NGN2 331 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 PFN4Q8NHR9 129 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 GATAD2BQ8WXI9 593 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 TMEM203Q969S6 136 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 FAM46AQ96IP4 442 aaKnown RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 CITED1Q99966 193 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 PRSS27Q9BQR3 290 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 C11orf54Q9H0W9 315 aaPredicted RBP6.55□□□□□ -1.36
CLK1-215ENST00000621181 MARCH7Q9H992 704 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 NEK6Q9HC98 313 aa6.55□□□□□ -1.36
CLK1-215ENST00000621181 A0A1W2PPL8 197 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 MEIOCA2RUB1 952 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 SRRM5B3KS81 715 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 TMEM178BH3BS89 294 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 OR7A10O76100 309 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 APOL3O95236 402 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 CST2P09228 141 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 WNT2P09544 360 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 MYL12AP19105 171 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 GALP22466 123 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 HTR1FP30939 366 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 FXYD6P3P58550 94 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 TAS2R41P59536 307 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 MXD1Q05195 221 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 ST3GAL3Q11203 375 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 PDCD1Q15116 288 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 SLC35F1Q5T1Q4 408 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 TMEM91Q6ZNR0 172 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 Q6ZR03 302 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 C1QL4Q86Z23 238 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 NPEPL1Q8NDH3 523 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 OR52N1Q8NH53 320 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 TEX47Q8TBZ9 253 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 TMEM255BQ8WV15 326 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 RAB40AQ8WXH6 277 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 UFD1Q92890 307 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 SGTBQ96EQ0 304 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 RBP7Q96R05 134 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 COQ7Q99807 217 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 ATF6BQ99941 703 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 GCM1Q9NP62 436 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 C20orf141Q9NUB4 165 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 MIOXQ9UGB7 285 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 CDH10Q9Y6N8 788 aa6.54□□□□□ -1.36
CLK1-215ENST00000621181 CLPSL1A2RUU4 121 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 NPIPB13A6NJU9 1138 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 SNTNA6NMZ2 147 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 C12orf71A8MTZ7 269 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 NPIPB4C9JG80 1138 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 CDC42EP2O14613 210 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 RGS5O15539 181 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 TSPAN19P0C672 248 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 KITLGP21583 273 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 MSR1P21757 451 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 TUBG1P23258 451 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 CPT2P23786 658 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 AZGP1P25311 298 aaKnown RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 PTBP1P26599 531 aaKnown RBP eCLIP6.53□□□□□ -1.36
CLK1-215ENST00000621181 PAX2Q02962 417 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 SCN1BQ07699 218 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 ALG10Q5BKT4 473 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 DDI2Q5TDH0 399 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 SLC25A47Q6Q0C1 308 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 METAP1DQ6UB28 335 aaPredicted RBP6.53□□□□□ -1.36
CLK1-215ENST00000621181 SHFQ7M4L6 423 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 KLBQ86Z14 1044 aa6.53□□□□□ -1.36
CLK1-215ENST00000621181 NRMQ8IXM6 262 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms