RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 GABREP78334 506 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 CHRFAM7AQ494W8 412 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 AWAT1Q58HT5 328 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 DOK3Q7L591 496 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 OR9K2Q8NGE7 335 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 PARP12Q9H0J9 701 aaKnown RBP17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 GSN-AS1Q9NRJ2 163 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 MYO7BQ6PIF6 2116 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 IGHV3-20A0A0C4DH32 117 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 RER1O15258 196 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 S100A6P06703 90 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 BLVRBP30043 206 aaPredicted RBP17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 SNCAP37840 140 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 SUMO3P55854 103 aaPredicted RBP17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 FOXL2P58012 376 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 TSC22D1Q15714 1073 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 C1orf189Q5VU69 101 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 FAM57BQ71RH2 274 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 ZNF561Q8N587 486 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 OR14K1Q8NGZ2 314 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 FNDC9Q8TBE3 224 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 ZDHHC12Q96GR4 267 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 CD207Q9UJ71 328 aa17.21■□□□□ 0.35
PDLIM3-212ENST00000620787 IGKV1D-8A0A087WSZ0 117 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 VSTM2BA6NLU5 285 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 E9PLN8 166 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 S100A9P06702 114 aaKnown RBP17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 TGIF1Q15583 401 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 GALNTL5Q7Z4T8 443 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 C17orf82Q86X59 251 aaPredicted RBP17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 KDF1Q8NAX2 398 aaPredicted RBP17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 UBAC2Q8NBM4 344 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 ERGIC1Q969X5 290 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 FBXO17Q96EF6 278 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 SHDQ96IW2 340 aa17.21■□□□□ 0.34
PDLIM3-212ENST00000620787 SPTBN5Q9NRC6 3674 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 C7orf77A4D0Y5 90 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 C5orf63A6NC05 138 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 PRF1P14222 555 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 KISS1Q15726 138 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 MRPL24Q96A35 216 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 TAAR9Q96RI9 348 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 ARV1Q9H2C2 271 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 LSM5Q9Y4Y9 91 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 A6NLC8 198 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 TSPAN15O95858 294 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 SNRNP70P08621 437 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 ALDH3B1P43353 468 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 UCP2P55851 309 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 MYBPHQ13203 477 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 MIDNQ504T8 468 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 GGNBP1Q5YKI7 109 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 SLC25A47Q6Q0C1 308 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 SHISA6Q6ZSJ9 500 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 UEVLDQ8IX04 471 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 SEMA6DQ8NFY4 1073 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 IP6K3Q96PC2 410 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 RAB33BQ9H082 229 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 TUBA4BQ9H853 241 aa17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 METTL1Q9UBP6 276 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-212ENST00000620787 RALGAPA1Q6GYQ0 2036 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 A0A1W2PPH5 198 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 IGHG1P01857 330 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 NAT2P11245 290 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 NME1P15531 152 aaKnown RBP17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 C7orf61Q8IZ16 206 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 ZNF283Q8N7M2 679 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 THAP3Q8WTV1 239 aaPredicted RBP17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 NPRL2Q8WTW4 380 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 SLC39A7Q92504 469 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 TCEAL3Q969E4 200 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 ISOC2Q96AB3 205 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 BSCL2Q96G97 398 aaPredicted RBP17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 LIN37Q96GY3 246 aaPredicted RBP17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 CLEC1BQ9P126 229 aa17.19■□□□□ 0.34
PDLIM3-212ENST00000620787 SERPINE3A8MV23 424 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 TRAF3IP2O43734 574 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 ACKR3P25106 362 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 PMELP40967 661 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 GUK1Q16774 197 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 DEFB133Q30KQ1 61 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 CARD17Q5XLA6 110 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 MESP1Q9BRJ9 268 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 ZNF2Q9BSG1 426 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 FAM212BQ9NTI7 297 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 ZNF701Q9NV72 531 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 NCOA6Q14686 2063 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 CRYM-AS1A6NIL9 109 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 ETV2O00321 342 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 NME2P1O60361 137 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 CTSDP07339 412 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 SERPINA2P20848 420 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 CSNK1EP49674 416 aaKnown RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 DLX2Q07687 328 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 FABP9Q0Z7S8 132 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 SULF2Q8IWU5 870 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 SGPP2Q8IWX5 399 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 COMMD1Q8N668 190 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 LYZL4Q96KX0 146 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 TM2D1Q9BX74 207 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms