RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 FAM60AQ9NP50 221 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 IGKV1-8A0A0C4DH67 115 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 C9orf170A2RU37 121 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 ST8SIA3O43173 380 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 YIF1AO95070 293 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 OPRM1P35372 400 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 NKX2-1P43699 371 aaPredicted RBP7.47□□□□□ -1.21
ALMS1-208ENST00000620466 SUMO3P55854 103 aaPredicted RBP7.47□□□□□ -1.21
ALMS1-208ENST00000620466 PWWP2BQ6NUJ5 590 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 TMEM92Q6UXU6 159 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 THNSL2Q86YJ6 484 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 CLRN3Q8NCR9 226 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 MENTQ9BUN1 341 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 BARX1Q9HBU1 254 aaPredicted RBP7.47□□□□□ -1.21
ALMS1-208ENST00000620466 POLDIP2Q9Y2S7 368 aa7.47□□□□□ -1.21
ALMS1-208ENST00000620466 SEC14L6B5MCN3 397 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 UMAD1C9J7I0 102 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 SPRY1O43609 319 aaPredicted RBP7.46□□□□□ -1.21
ALMS1-208ENST00000620466 LRP3O75074 770 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 CD96P40200 585 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 CLDN15P56746 228 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 IFITM2Q01629 132 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 DHRS2Q13268 280 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 LYPD8Q6UX82 237 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 OR2W3Q7Z3T1 314 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 ZDHHC23Q8IYP9 409 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 DEFB108BQ8NET1 73 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 GPR137Q96N19 417 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 PPP1R3EQ9H7J1 279 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 AK3Q9UIJ7 227 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 RAB19A4D1S5 217 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 CYR61O00622 381 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 HPXP02790 462 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 TAF9Q16594 264 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 TMEM128Q5BJH2 165 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 ZFP62Q8NB50 900 aaPredicted RBP7.46□□□□□ -1.21
ALMS1-208ENST00000620466 OR10AD1Q8NGE0 317 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 SARAFQ96BY9 339 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 TAAR9Q96RI9 348 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 GABRG3Q99928 467 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 LHX9Q9NQ69 397 aa7.46□□□□□ -1.21
ALMS1-208ENST00000620466 PATJQ8NI35 1801 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 PLPP3O14495 311 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 NRASP01111 189 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 CPN1P15169 458 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 TOMM34Q15785 309 aaPredicted RBP7.46□□□□□ -1.22
ALMS1-208ENST00000620466 TSEN54Q7Z6J9 526 aaKnown RBP7.46□□□□□ -1.22
ALMS1-208ENST00000620466 FBXL14Q8N1E6 418 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 LFNGQ8NES3 379 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 OR1L3Q8NH93 324 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 CHST6Q9GZX3 395 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 E5RGE8 158 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 FPR2P25090 351 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 PIGPP57054 158 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 CD226Q15762 336 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 UQCC3Q6UW78 93 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 LSMEM1Q8N8F7 131 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 OR5M9Q8NGP3 310 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 SFT2D1Q8WV19 159 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 LRRC3BQ96PB8 259 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 NIPSNAP3BQ9BS92 247 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 NSG2Q9Y328 171 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 STRAPQ9Y3F4 350 aaKnown RBP7.46□□□□□ -1.22
ALMS1-208ENST00000620466 MICAL3Q7RTP6 2002 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 FIGNL2A6NMB9 653 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 HMSDA8MTL9 139 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 ZNF705AQ6ZN79 300 aaPredicted RBP7.46□□□□□ -1.22
ALMS1-208ENST00000620466 ATG4DQ86TL0 474 aaPredicted RBP7.46□□□□□ -1.22
ALMS1-208ENST00000620466 ARHGEF39Q8N4T4 335 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 TMEM52Q8NDY8 209 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 VSTM2LQ96N03 204 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 PRSS27Q9BQR3 290 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 CNTD2Q9H8S5 307 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 ZNF230Q9UIE0 474 aaPredicted RBP7.46□□□□□ -1.22
ALMS1-208ENST00000620466 RCL1Q9Y2P8 373 aaKnown RBP7.46□□□□□ -1.22
ALMS1-208ENST00000620466 SLCO1B1Q9Y6L6 691 aa7.46□□□□□ -1.22
ALMS1-208ENST00000620466 PIAS2O75928 621 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 DFFBO76075 338 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 VAMP5O95183 116 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 OR2C1O95371 312 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 SFTA3P0C7M3 94 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 ERGP11308 486 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 THBS4P35443 961 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 SHBQ15464 509 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 RGS7BPQ6MZT1 257 aaPredicted RBP7.45□□□□□ -1.22
ALMS1-208ENST00000620466 RPUSD3Q6P087 351 aaKnown RBP7.45□□□□□ -1.22
ALMS1-208ENST00000620466 ZNF573Q86YE8 665 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 C1orf87Q8N0U7 546 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 ZPLD1Q8TCW7 415 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 GPX8Q8TED1 209 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 PCDHGA9Q9Y5G4 932 aaKnown RBP7.45□□□□□ -1.22
ALMS1-208ENST00000620466 TNFSF14O43557 240 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 PTP4A3O75365 173 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 HPNP05981 417 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 FAHP16930 419 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 MESP2Q0VG99 397 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 ETFDHQ16134 617 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 C1orf53Q5VUE5 145 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 TMEM268Q5VZI3 342 aa7.45□□□□□ -1.22
ALMS1-208ENST00000620466 FBXW5Q969U6 566 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms