RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SLC17A4Q9Y2C5 497 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 ZC3H12DA2A288 527 aaKnown RBP13.61□□□□□ -0.23
COL5A1-208ENST00000618395 LYSMD4Q5XG99 296 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 LHFPL2Q6ZUX7 228 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 FURINP09958 794 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 PRSS54Q6PEW0 395 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 NHLRC1Q6VVB1 395 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF595Q8IYB9 648 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 PSMG3Q9BT73 122 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-208ENST00000618395 SLC25A22Q9H936 323 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 PSG11Q9UQ72 335 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 SLC5A6Q9Y289 635 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 SLIT2O94813 1529 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 LOC107986453A0A1B0GWG9 222 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 CD1BP29016 333 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 OPRM1P35372 400 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 TCL1AP56279 114 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 CD226Q15762 336 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 SERPINE3A8MV23 424 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 PPP6CO00743 305 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 GNB1P62873 340 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 PAQR6Q6TCH4 344 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 OR1L4Q8NGR5 311 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 DERL3Q96Q80 235 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 SLC17A5Q9NRA2 495 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 HPP00738 406 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 RIGQ13278 110 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 H7C2G1 150 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 SMAD6O43541 496 aaKnown RBP13.61□□□□□ -0.23
COL5A1-208ENST00000618395 WRAP73Q9P2S5 460 aaPredicted RBP13.61□□□□□ -0.23
COL5A1-208ENST00000618395 APC2O95996 2303 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 ANKRD36A6QL64 1941 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 WNT1P04628 370 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 SLC35E2P0CK97 266 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 PRSS56P0CW18 603 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 IER3P46695 156 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 HHEXQ03014 270 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 FTSJ1Q9UET6 329 aa13.61□□□□□ -0.23
COL5A1-208ENST00000618395 TCRBV21S2A2A0A5A6 115 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 HPXP02790 462 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 SLC25A5P05141 298 aaKnown RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 ELAVL3Q14576 367 aaKnown RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 EXOSC7Q15024 291 aaKnown RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 ACVR1CQ8NER5 493 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 UBTD2Q8WUN7 234 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 GPR62Q9BZJ7 368 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 C4AP0C0L4 1744 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 C4BP0C0L5 1744 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 YLPM1P49750 1951 aaKnown RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF217O75362 1048 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 EGLN2Q96KS0 407 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 ALX4Q9H161 411 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 RGPD1P0DJD0 1748 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 ACTL6AO96019 429 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 OR8B8Q15620 311 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 PFN4Q8NHR9 129 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 SLC25A33Q9BSK2 321 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 CA1P00915 261 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 SMIM13P0DJ93 91 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 TPBGQ13641 420 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 NUDT10Q8NFP7 164 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 JAM3Q9BX67 310 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 COMMD5Q9GZQ3 224 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 RBM38Q9H0Z9 239 aaKnown RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF275Q9NSD4 429 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 MYOFQ9NZM1 2061 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 TRGC2P03986 189 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 EPHA8P29322 1005 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-208ENST00000618395 XAF1Q6GPH4 301 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 ROBO4Q8WZ75 1007 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 NTNG1Q9Y2I2 539 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 KNDC1Q76NI1 1749 aa13.6□□□□□ -0.23
COL5A1-208ENST00000618395 GTF3C1Q12789 2109 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 LOC105371267A0A1B0GV96 52 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 GPX2P18283 190 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 SUOXP51687 545 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 TMEM33P57088 247 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 ASB16Q96NS5 453 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 ADAP1O75689 374 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 EDDM3BP56851 147 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 CTAG1AP78358 180 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 ADTRPQ96IZ2 230 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 SAP30LQ9HAJ7 183 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 PARP11Q9NR21 331 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 RPS4Y1P22090 263 aaKnown RBP13.59□□□□□ -0.23
COL5A1-208ENST00000618395 SLC37A1P57057 533 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 PPP1R1AQ13522 171 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 PLXDC1Q8IUK5 500 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 SYS1Q8N2H4 156 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 FBXO4Q9UKT5 387 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 C3P01024 1663 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 NEURL4Q96JN8 1562 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 WDTC1Q8N5D0 677 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 GUCD1Q96NT3 240 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 C1orf105O95561 183 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 METAP1P53582 386 aa13.59□□□□□ -0.23
COL5A1-208ENST00000618395 LRRTM3Q86VH5 581 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms