RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 C10orf111Q8N326 155 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 PPP1R1CQ8WVI7 109 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 PLA2G3Q9NZ20 509 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 BAMBIQ13145 260 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 TMEM182Q6ZP80 229 aaPredicted RBP13.15□□□□□ -0.3
SNPH-203ENST00000614659 LAMP3Q9UQV4 416 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 CYR61O00622 381 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 HSPB6O14558 160 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 NME2P1O60361 137 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 LRP3O75074 770 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 CD80P33681 288 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 RPS27P42677 84 aaKnown RBP13.15□□□□□ -0.3
SNPH-203ENST00000614659 VASH2Q86V25 355 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 OR1F12Q8NHA8 337 aa13.15□□□□□ -0.3
SNPH-203ENST00000614659 TRMT61AQ96FX7 289 aaKnown RBP13.15□□□□□ -0.3
SNPH-203ENST00000614659 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.31
SNPH-203ENST00000614659 RALGAPA2Q2PPJ7 1873 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 MBP02144 154 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 CSRP2Q16527 193 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 C17orf47Q8NEP4 570 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 TMED6Q8WW62 240 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 BSCL2Q96G97 398 aaPredicted RBP13.14□□□□□ -0.31
SNPH-203ENST00000614659 FN3KRPQ9HA64 309 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 OSGIN2Q9Y236 505 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 TTC3P53804 2025 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 GREM1O60565 184 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 TLE1Q04724 770 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 RND1Q92730 232 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 MIXL1Q9H2W2 232 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 ZNF724A8MTY0 619 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 DCTN6O00399 190 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 HIST1H1DP16402 221 aaKnown RBP13.14□□□□□ -0.31
SNPH-203ENST00000614659 EDDM3BP56851 147 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 PDZD11Q5EBL8 140 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 GCNT2Q8N0V5 402 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 ST6GAL2Q96JF0 529 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 ING1Q9UK53 422 aaPredicted RBP13.14□□□□□ -0.31
SNPH-203ENST00000614659 DLL1O00548 723 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 OPRM1P35372 400 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 SLC23A3Q6PIS1 610 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 PRSS41Q7RTY9 318 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
SNPH-203ENST00000614659 ARSGQ96EG1 525 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 WDR89Q96FK6 387 aaPredicted RBP13.14□□□□□ -0.31
SNPH-203ENST00000614659 CIB3Q96Q77 187 aaPredicted RBP13.14□□□□□ -0.31
SNPH-203ENST00000614659 AK3Q9UIJ7 227 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 AMDHD2Q9Y303 409 aa13.14□□□□□ -0.31
SNPH-203ENST00000614659 MIA3Q5JRA6 1907 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
SNPH-203ENST00000614659 H2BFWTQ7Z2G1 175 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 FLRT3Q9NZU0 649 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 PILRBQ9UKJ0 227 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 POLR2AP24928 1970 aaKnown RBP13.13□□□□□ -0.31
SNPH-203ENST00000614659 DHRS3O75911 302 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 GRPP07492 148 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 SNCAP37840 140 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 TMEM108Q6UXF1 575 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 Q6ZRG5 221 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 RELL2Q8NC24 303 aaPredicted RBP13.13□□□□□ -0.31
SNPH-203ENST00000614659 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
SNPH-203ENST00000614659 MYO16Q9Y6X6 1858 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 EPPINO95925 133 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 IGHV4-34P06331 123 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 NDUFB7P17568 137 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 HABP2Q14520 560 aaPredicted RBP13.13□□□□□ -0.31
SNPH-203ENST00000614659 PHYHD1Q5SRE7 291 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 CISD2Q8N5K1 135 aaKnown RBP13.13□□□□□ -0.31
SNPH-203ENST00000614659 SLC35G3Q8N808 338 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 NPEPL1Q8NDH3 523 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 GPR119Q8TDV5 335 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 ASB10Q8WXI3 467 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 FBXO34Q9NWN3 711 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 OCIAD1Q9NX40 245 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 ENSAO43768 121 aaKnown RBP13.13□□□□□ -0.31
SNPH-203ENST00000614659 IGHV3-9P01782 118 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 FABP1P07148 127 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 GUCA2AQ02747 115 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 RNF151Q2KHN1 245 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 ZNF528Q3MIS6 628 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 MOB1BQ7L9L4 216 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 Q8IYB0 196 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 OR52B4Q8NGK2 314 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 CORO2AQ92828 525 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 NTNG2Q96CW9 530 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
SNPH-203ENST00000614659 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
SNPH-203ENST00000614659 SFT2D2O95562 160 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 TMIGD3P0DMS9 266 aaPredicted RBP13.12□□□□□ -0.31
SNPH-203ENST00000614659 PSG6Q00889 435 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 LY86O95711 162 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 METTL15P1P0C7V9 234 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 PIGPP57054 158 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 RAC1P63000 192 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 ZNF770Q6IQ21 691 aaPredicted RBP13.12□□□□□ -0.31
SNPH-203ENST00000614659 SCCPDHQ8NBX0 429 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 ORAI1Q96D31 301 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 RAB33BQ9H082 229 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms