RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 PRRT4C9JH25 899 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 TIMM8AO60220 97 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-211ENST00000613795 HPXP02790 462 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 SEMG1P04279 462 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 SEC11BP0C7V7 166 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 TCN2P20062 427 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 GPR3P46089 330 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 ERVFC1-1P60608 527 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 PYCR3Q53H96 274 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 OR4A47Q6IF82 309 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 DHRS11Q6UWP2 260 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 DGAT2L6Q6ZPD8 337 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 DCXRQ7Z4W1 244 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 LSRQ86X29 649 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-211ENST00000613795 ZNRF4Q8WWF5 429 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 Q96M85 177 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 FOXN4Q96NZ1 517 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 STARD5Q9NSY2 213 aa6.2□□□□□ -1.42
CLCN3-211ENST00000613795 LIN7CQ9NUP9 197 aaKnown RBP6.2□□□□□ -1.42
CLCN3-211ENST00000613795 KLF13Q9Y2Y9 288 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-211ENST00000613795 DVL1O14640 695 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 BCL6P41182 706 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 CYB561P49447 251 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 CDKN3Q16667 212 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 FAM27D1Q5T7N8 215 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 BTNL3Q6UXE8 466 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 MED25Q71SY5 747 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 RTL8AQ9BWD3 113 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 EGLN1Q9GZT9 426 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 PPP1R3EQ9H7J1 279 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 PDFQ9HBH1 243 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 RNF24Q9Y225 148 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 LOC102723971A0A1B0GUV8 181 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 LINC00587B1AMM8 73 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 GEMIN2O14893 280 aaKnown RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 XRCC2O43543 280 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 CTAG2O75638 210 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 NPPBP16860 134 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ACKR1Q16570 336 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 HLA-DRB5Q30154 266 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 TMEM176BQ3YBM2 270 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 SPANXN5Q5MJ07 72 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 H2BFWTQ7Z2G1 175 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 OR4S1Q8NGB4 309 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 OR10J5Q8NHC4 309 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 TRIB1Q96RU8 372 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 BANF2Q9H503 90 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 SPINT2O43291 252 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 SEMA7AO75326 666 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 HLA-DQB1P01920 261 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 HOXC4P09017 264 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 PSMB5P28074 263 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 SURF2Q15527 256 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 THEM4Q5T1C6 240 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 C1orf140Q5VVS0 124 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ZNF343Q6P1L6 599 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 DRAM2Q6UX65 266 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 LHFPL2Q6ZUX7 228 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 FA2HQ7L5A8 372 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 EIF4E3Q8N5X7 224 aaKnown RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 FAM173AQ9BQD7 235 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 CHST6Q9GZX3 395 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 UQCR10Q9UDW1 63 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 PRSS50Q9UI38 385 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 RPH3ALQ9UNE2 315 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 CACNA1SQ13698 1873 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 KIAA1324LA8MWY0 1029 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ZNF737O75373 536 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 DAOP14920 347 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ZNF17P17021 662 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 HMGA1P17096 107 aaKnown RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 TMEM33P57088 247 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 TRA2AQ13595 282 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 FAM78BQ5VT40 261 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ZNF660Q6AZW8 331 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 OR5D18Q8NGL1 313 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 OR4A4PQ8NGN8 299 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 NUDT8Q8WV74 236 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 RAB40CQ96S21 281 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 SERTM1A2A2V5 107 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 TMEM210A6NLX4 147 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 GPM6AP51674 278 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ADPRHP54922 357 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ERVS71-1P61550 626 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 PLAC9Q5JTB6 97 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 RNASEKQ6P5S7 137 aaKnown RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 CYHR1Q6ZMK1 362 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 MAML2Q8IZL2 1156 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 NEIL1Q96FI4 390 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 OPN3Q9H1Y3 402 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-211ENST00000613795 DECR2Q9NUI1 292 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 KCNK7Q9Y2U2 307 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ASB1Q9Y576 335 aa6.19□□□□□ -1.42
CLCN3-211ENST00000613795 ANKRD12Q6UB98 2062 aa6.18□□□□□ -1.42
CLCN3-211ENST00000613795 SDCBPO00560 298 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-211ENST00000613795 DEDDO75618 318 aa6.18□□□□□ -1.42
CLCN3-211ENST00000613795 NXPH3O95157 252 aa6.18□□□□□ -1.42
CLCN3-211ENST00000613795 SRFP11831 508 aa6.18□□□□□ -1.42
CLCN3-211ENST00000613795 PPOXP50336 477 aa6.18□□□□□ -1.42
CLCN3-211ENST00000613795 SUB1P53999 127 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms