RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 TMEM27Q9HBJ8 222 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 HINT3Q9NQE9 182 aaKnown RBP5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 CMC2Q9NRP2 79 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 HRASLS2Q9NWW9 162 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 WNT16Q9UBV4 365 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 STEAP1Q9UHE8 339 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 SERTAD3Q9UJW9 196 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 SIGLEC7Q9Y286 467 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 NTNG1Q9Y2I2 539 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 FAM96BQ9Y3D0 163 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 CCDC88CQ9P219 2028 aa5.95□□□□□ -1.46
CDKAL1-204ENST00000613575 LOC105371242A0A075B767 164 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 A0A0B4J2E0 115 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 IGHV2-70DA0A0C4DH43 119 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CENPVL1A0A0U1RR11 272 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 SPTY2D1-AS1A0A0U1RR47 76 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 A0A1B0GX12 115 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 C7orf77A4D0Y5 90 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 GGT3PA6NGU5 568 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 A8MVM7 634 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 PROB1E7EW31 1015 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 F5H5P2 479 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 PLPP2O43688 288 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 NCR1O76036 304 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 SLC2A10O95528 541 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 TXNDC12O95881 172 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 IL18BPO95998 194 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 ACTL6AO96019 429 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 IGHV4-34P06331 123 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 UMODP07911 640 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 OR10J4P0C629 311 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 GABRG2P18507 467 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 GABRA3P34903 492 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CASRP41180 1078 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 RFX3P48380 749 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CRYBA4P53673 196 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 ATP5IP56385 69 aaPredicted RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 PITPNAQ00169 270 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 DLX2Q07687 328 aaPredicted RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 FHL1Q13642 323 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 ZNF141Q15928 474 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 MSMPQ1L6U9 139 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 PRTGQ2VWP7 1150 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 MRPL2Q5T653 305 aaKnown RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 PRR27Q6MZM9 219 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 UNQ9370/PRO34162Q6UXP9 181 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 GLDNQ6ZMI3 551 aaPredicted RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 FCRLAQ7L513 359 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 MEX3DQ86XN8 651 aaKnown RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 ZNF100Q8IYN0 542 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 KCNRGQ8N5I3 272 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 FAM24BQ8N5W8 94 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CSNK1A1LQ8N752 337 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 SLC35G3Q8N808 338 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 TMEM52Q8NDY8 209 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 STT3BQ8TCJ2 826 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 SPRYD4Q8WW59 207 aaPredicted RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 RLN3Q8WXF3 142 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CACNG8Q8WXS5 425 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 RGP1Q92546 391 aaPredicted RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 RASD2Q96D21 266 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 HSPA12BQ96MM6 686 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 HIST1H2BLQ99880 126 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CHRNA10Q9GZZ6 450 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CST9LQ9H4G1 147 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CLDND1Q9NY35 253 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CACFD1Q9UGQ2 172 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 MMP17Q9ULZ9 603 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 DOCK8Q8NF50 2099 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 C2orf16Q68DN1 1984 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 SETXQ7Z333 2677 aaKnown RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 MUC6Q6W4X9 2439 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 PLXND1Q9Y4D7 1925 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 OR6C76A6NM76 312 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 PPP5D1E7EU14 171 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 RNASEK-C17orf49H0YIS7 233 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 KLRC4-KLRK1H3BQV0 150 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 AQP7O14520 342 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 SMAD7O15105 426 aaKnown RBP5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 FOXS1O43638 330 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 HIST1H2BKO60814 126 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 LDB3O75112 727 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 SEMA4FO95754 770 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CH25HO95992 272 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 HPRT1P00492 218 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 KNG1P01042 644 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CD1AP06126 327 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 HIST1H2BJP06899 126 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CT62P0C5K7 136 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 BMP5P22003 454 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 HIST1H2BOP23527 126 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CCKARP32238 428 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 HIST1H2BBP33778 126 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 APLNRP35414 380 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 LTBRP36941 435 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 MTNR1BP49286 362 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 EMDP50402 254 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 CAV2P51636 162 aa5.94□□□□□ -1.46
CDKAL1-204ENST00000613575 HIST1H2BDP58876 126 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms