RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 SIRT4Q9Y6E7 314 aaPredicted RBP13.97□□□□□ -0.17
IRF1-211ENST00000613424 ISPDA4D126 451 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 TMEM210A6NLX4 147 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 TMEM212A6NML5 194 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 ZNF732B4DXR9 585 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 OGG1O15527 345 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 IGHV4-31P0DP07 118 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 CRHBPP24387 322 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 LMO4P61968 165 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 BTG1P62324 171 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 GNG3P63215 75 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 HOXA4Q00056 320 aaPredicted RBP13.96□□□□□ -0.17
IRF1-211ENST00000613424 KRTAP1-1Q07627 177 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 CDK5R1Q15078 307 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 ZMYND11Q15326 602 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 RNLSQ5VYX0 342 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 RPS4Y2Q8TD47 263 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 RPL3LQ92901 407 aaKnown RBP13.96□□□□□ -0.17
IRF1-211ENST00000613424 FGGYQ96C11 551 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 C10orf35Q96D05 121 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 ADAT3Q96EY9 351 aaPredicted RBP13.96□□□□□ -0.17
IRF1-211ENST00000613424 CDCA4Q9BXL8 241 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 COMMD4Q9H0A8 199 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 TLNRD1Q9H1K6 362 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 RASSF4Q9H2L5 321 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 Q9H521 79 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 TMEM165Q9HC07 324 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 UBAP1Q9NZ09 502 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 ERVK-18Q9QC07 812 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 ERGIC3Q9Y282 383 aa13.96□□□□□ -0.17
IRF1-211ENST00000613424 TEP1Q99973 2627 aaKnown RBP13.95□□□□□ -0.18
IRF1-211ENST00000613424 CSPG4Q6UVK1 2322 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 PPIAL4EA0A075B759 164 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 hCG_1807616A0A1W2PRN6 198 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 ANKRD61A6NGH8 418 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 PPIAL4DF5H284 164 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 CDIPTO14735 213 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 MYL12BO14950 172 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 LHBP01229 141 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 RPSAP08865 295 aaKnown RBP13.95□□□□□ -0.18
IRF1-211ENST00000613424 PPIAL4FP0DN26 164 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 WNT4P56705 351 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 UBE2V2Q15819 145 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 RBM48Q5RL73 367 aaKnown RBP13.95□□□□□ -0.18
IRF1-211ENST00000613424 CYB5R2Q6BCY4 276 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 SCCPDHQ8NBX0 429 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 OR13C3Q8NGS6 347 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 GAL3ST1Q99999 423 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 OR51I2Q9H344 312 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 METTL17Q9H7H0 456 aaPredicted RBP13.95□□□□□ -0.18
IRF1-211ENST00000613424 TRIM36Q9NQ86 728 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 PPIAL4AQ9Y536 164 aa13.95□□□□□ -0.18
IRF1-211ENST00000613424 OR5B21A6NL26 309 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 SERPINA3P01011 423 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 MDH2P40926 338 aaKnown RBP13.94□□□□□ -0.18
IRF1-211ENST00000613424 GZMKP49863 264 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 DOC2BQ14184 412 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 IRF3Q14653 427 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 TMEM155Q4W5P6 130 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 WDR82Q6UXN9 313 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 Q71RC1 249 aaPredicted RBP13.94□□□□□ -0.18
IRF1-211ENST00000613424 GCSAMQ8N6F7 178 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 ZFP41Q8N8Y5 198 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 BOLLQ8N9W6 283 aaKnown RBP13.94□□□□□ -0.18
IRF1-211ENST00000613424 C19orf18Q8NEA5 215 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 PP6455Q8WZ26 134 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 MSI2Q96DH6 328 aaKnown RBP13.94□□□□□ -0.18
IRF1-211ENST00000613424 C1orf159Q96HA4 380 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 CHST5Q9GZS9 411 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 ZNF665Q9H7R5 613 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 ABCA1O95477 2261 aa13.94□□□□□ -0.18
IRF1-211ENST00000613424 PQLC2LA1A4F0 135 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 RGS10O43665 173 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 CD5LO43866 347 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 GATBO75879 557 aaKnown RBP13.93□□□□□ -0.18
IRF1-211ENST00000613424 FSTL3O95633 263 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 IGHV2-5P01817 119 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 HEXAP06865 529 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 ZNF20P17024 532 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 CFHR2P36980 270 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 DMKNQ6E0U4 476 aaPredicted RBP13.93□□□□□ -0.18
IRF1-211ENST00000613424 SFRP4Q6FHJ7 346 aaPredicted RBP13.93□□□□□ -0.18
IRF1-211ENST00000613424 DEFB108BQ8NET1 73 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 LRRC29Q8WV35 223 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 RGP1Q92546 391 aaPredicted RBP13.93□□□□□ -0.18
IRF1-211ENST00000613424 GHSRQ92847 366 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 SMIM19Q96E16 107 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 MND1Q9BWT6 205 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 SLC7A11Q9UPY5 501 aa13.93□□□□□ -0.18
IRF1-211ENST00000613424 ANK3Q12955 4377 aaKnown RBP13.92□□□□□ -0.18
IRF1-211ENST00000613424 FAM157AC9JC47 383 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 MT-ND2P03891 347 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 EGR1P18146 543 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 CD80P33681 288 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 TAS2R43P59537 309 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 ZNF404Q494X3 552 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 UTS2BQ765I0 119 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 PRSS48Q7RTY5 328 aa13.92□□□□□ -0.18
IRF1-211ENST00000613424 MUC20Q8N307 709 aaPredicted RBP13.92□□□□□ -0.18
IRF1-211ENST00000613424 SPICQ8N5J4 248 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms