RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CGGBP1Q9UFW8 167 aaPredicted RBP9.65□□□□□ -0.86
FAM3A-221ENST00000612856 AUP1Q9Y679 476 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 SURF4O15260 269 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 CYTIPO60759 359 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 SNAPC5O75971 98 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 AKAIN1P0CW23 69 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 TAS2R20P59543 309 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 RPL27P61353 136 aaKnown RBP9.65□□□□□ -0.86
FAM3A-221ENST00000612856 EDDM3AQ14507 147 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF124Q15973 351 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 BATFQ16520 125 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 MAMSTRQ6ZN01 415 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF383Q8NA42 475 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 RNF141Q8WVD5 230 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 RGP1Q92546 391 aaPredicted RBP9.65□□□□□ -0.86
FAM3A-221ENST00000612856 FGGYQ96C11 551 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 ST6GALNAC5Q9BVH7 336 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 LAT2Q9GZY6 243 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 MMP24Q9Y5R2 645 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 COL6A3P12111 3177 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 MED19A0JLT2 244 aaPredicted RBP9.65□□□□□ -0.86
FAM3A-221ENST00000612856 PHOX2AO14813 284 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 TSPAN15O95858 294 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 IGKV1D-16P01601 117 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 RPA2P15927 270 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 ADH6P28332 368 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 LIMK1P53667 647 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 C4orf17Q53FE4 359 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 TMEM205Q6UW68 189 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 KCNRGQ8N5I3 272 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 GPR148Q8TDV2 347 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 LOXL4Q96JB6 756 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 SELENOIQ9C0D9 397 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 IL20Q9NYY1 176 aa9.65□□□□□ -0.86
FAM3A-221ENST00000612856 A0A087WUJ7 227 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF850A8MQ14 1090 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 IFNA17P01571 189 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 THBS1P07996 1170 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 VSIG10L2P0DP72 767 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 ATP1B3P54709 279 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 MTCP1P56278 107 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF620Q6ZNG0 422 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 ARIH2OSQ8N7S6 290 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 FOXRED1Q96CU9 486 aaPredicted RBP9.65□□□□□ -0.87
FAM3A-221ENST00000612856 SOSTQ9BQB4 213 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 NRIP3Q9NQ35 241 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 TINAGQ9UJW2 476 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 MOKQ9UQ07 419 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 OSGIN2Q9Y236 505 aa9.65□□□□□ -0.87
FAM3A-221ENST00000612856 TEX13DA0A0J9YY54 714 aaPredicted RBP9.64□□□□□ -0.87
FAM3A-221ENST00000612856 CXorf65A6NEN9 183 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 DCTN6O00399 190 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 AGFG2O95081 481 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 TMIGD3P0DMS9 266 aaPredicted RBP9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ACTA2P62736 377 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ACTG2P63267 376 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ABCA11PQ4W5N1 156 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 STEAP1BQ6NZ63 245 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 BPIFB2Q8N4F0 458 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF561Q8N587 486 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 OR2V1Q8NHB1 315 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 MMP25Q9NPA2 562 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 MAN2C1Q9NTJ4 1040 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ATP23Q9Y6H3 246 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 A0A1W2PPH5 198 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ANKRD30BLA7E2S9 258 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 GATCO43716 136 aaKnown RBP9.64□□□□□ -0.87
FAM3A-221ENST00000612856 NDUFB6O95139 128 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 SBK2P0C263 348 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ERGP11308 486 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 CD59P13987 128 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 RAB5CP51148 216 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 RAG2P55895 527 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 FUT5Q11128 374 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF468Q5VIY5 522 aaPredicted RBP9.64□□□□□ -0.87
FAM3A-221ENST00000612856 RSPO3Q9BXY4 272 aaPredicted RBP9.64□□□□□ -0.87
FAM3A-221ENST00000612856 RHOFQ9HBH0 211 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 DNAJB12Q9NXW2 375 aaKnown RBP9.64□□□□□ -0.87
FAM3A-221ENST00000612856 HHLA2Q9UM44 414 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 PROCRQ9UNN8 238 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 MED13Q9UHV7 2174 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 FAM221AA4D161 298 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 FITM1A5D6W6 292 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 RER1O15258 196 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 SFTA3P0C7M3 94 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 OR13C7P0DN81 318 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 C21orf58P58505 322 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 RNF113BQ8IZP6 322 aaKnown RBP9.64□□□□□ -0.87
FAM3A-221ENST00000612856 SPICQ8N5J4 248 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 ZCCHC14Q8WYQ9 949 aaKnown RBP9.64□□□□□ -0.87
FAM3A-221ENST00000612856 POLE3Q9NRF9 147 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 UQCC1Q9NVA1 299 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 RASL12Q9NYN1 266 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 KLK13Q9UKR3 277 aa9.64□□□□□ -0.87
FAM3A-221ENST00000612856 BTBD17A6NE02 478 aa9.63□□□□□ -0.87
FAM3A-221ENST00000612856 SNRPGP15A8MWD9 76 aa9.63□□□□□ -0.87
FAM3A-221ENST00000612856 ZNF814B7Z6K7 855 aa9.63□□□□□ -0.87
FAM3A-221ENST00000612856 IMPA2O14732 288 aa9.63□□□□□ -0.87
FAM3A-221ENST00000612856 TOX3O15405 576 aaPredicted RBP9.63□□□□□ -0.87
FAM3A-221ENST00000612856 AQP8O94778 261 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms