RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 LYRM1O43325 122 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 SCGNO76038 276 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 KDM4BO94953 1096 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 CD3GP09693 182 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 NAT2P11245 290 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 OPRM1P35372 400 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 PTGFRP43088 359 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 RFX2P48378 723 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 RBP2P50120 134 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 IDH3GP51553 393 aaPredicted RBP7.68□□□□□ -1.18
CCDC47-207ENST00000612558 FUT6P51993 359 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 MTCP1P56278 107 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 UNC119Q13432 240 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 FAM189A2Q15884 450 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 PRR30Q53SZ7 412 aaPredicted RBP7.68□□□□□ -1.18
CCDC47-207ENST00000612558 DMRTC1Q5HYR2 192 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 OR10K2Q6IF99 312 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 RAB12Q6IQ22 244 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 CRIP3Q6Q6R5 217 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 ZNF474Q6S9Z5 364 aaPredicted RBP7.68□□□□□ -1.18
CCDC47-207ENST00000612558 CCBE1Q6UXH8 406 aaPredicted RBP7.68□□□□□ -1.18
CCDC47-207ENST00000612558 LHFPL2Q6ZUX7 228 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 MOB3CQ70IA8 216 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 NRARPQ7Z6K4 114 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 BIVMQ86UB2 503 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 FTMTQ8N4E7 242 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 TOMM5Q8N4H5 51 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 FAM169BQ8N8A8 192 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 CSNK2A3Q8NEV1 391 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 KCNG3Q8TAE7 436 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 UBASH3BQ8TF42 649 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 NPRL2Q8WTW4 380 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 PIGCQ92535 297 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 PIGTQ969N2 578 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 FAM46BQ96A09 425 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 BORCS8Q96FH0 119 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 PIGMQ9H3S5 423 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 PRORYQ9H606 182 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 CDH20Q9HBT6 801 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 MOV10Q9HCE1 1003 aaKnown RBP7.68□□□□□ -1.18
CCDC47-207ENST00000612558 PTTG3PQ9NZH4 202 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 SLC7A11Q9UPY5 501 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 TPRP12270 2363 aaKnown RBP7.68□□□□□ -1.18
CCDC47-207ENST00000612558 POLEQ07864 2286 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 PCNX1Q96RV3 2341 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 TRAV18A0A075B6X5 111 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 FAM230AA0A1W2PPH8 454 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 TMEM8BA6NDV4 472 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 ORC5O43913 435 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 CST4P01036 141 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 CELA3BP08861 270 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 SFTPCP11686 197 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 SPNP16150 400 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 PSMB1P20618 241 aaKnown RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 IL32P24001 234 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 ATP1B3P54709 279 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 HLXQ14774 488 aaPredicted RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 C1QTNF12Q5T7M4 302 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 UNQ6126/PRO20091Q6UXV3 157 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 DNM1P46Q6ZS02 220 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 RFPL4BQ6ZWI9 263 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 CDH24Q86UP0 819 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 MYPOPQ86VE0 399 aaPredicted RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 OR56B2PQ8NGI1 322 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 OR52I2Q8NH67 350 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 TNFAIP8L1Q8WVP5 186 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 WBP1Q96G27 269 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 C1orf147Q96MC9 270 aaPredicted RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 S100A13Q99584 98 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 NUDT16L1Q9BRJ7 211 aaKnown RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 KRTAP9-9Q9BYP9 154 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 KRTAP9-4Q9BYQ2 154 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 CST11Q9H112 138 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 RBFOX1Q9NWB1 397 aaKnown RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 ZNF629Q9UEG4 869 aaPredicted RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 TINAGQ9UJW2 476 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 ING4Q9UNL4 249 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 RBMX2Q9Y388 322 aaKnown RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 HEATR1Q9H583 2144 aaKnown RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 A0A0G2JNJ9 132 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 CD300LBA8K4G0 201 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 ZNF850A8MQ14 1090 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 CENPXA8MT69 81 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 A8MXE2 369 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 RAB27BO00194 218 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 SSX4O60224 188 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 CDC14BO60729 498 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 SMPD2O60906 423 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 AGFG2O95081 481 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 ECDO95905 644 aaPredicted RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 IGLV1-44P01699 117 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 CHRM2P08172 466 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 GSTT2BP0CG30 244 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 TUBG1P23258 451 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 PRSS3P35030 304 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 PLA2G5P39877 138 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 GDNFP39905 211 aa7.67□□□□□ -1.18
CCDC47-207ENST00000612558 SRP9P49458 86 aaKnown RBP7.67□□□□□ -1.18
CCDC47-207ENST00000612558 UCP2P55851 309 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms