RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 NME2P1O60361 137 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 CRYBA1P05813 215 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 CHRM2P08172 466 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 RAB30Q15771 203 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 AADACL3Q5VUY0 350 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 MYOZ1Q9NP98 299 aaPredicted RBP12.35□□□□□ -0.43
COL6A1-207ENST00000612273 PRELID3BQ9Y3B1 194 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 MBTPS2O43462 519 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 SEMA6DQ8NFY4 1073 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 PTX4Q96A99 478 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 PHYHIPLQ96FC7 376 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 BSCL2Q96G97 398 aaPredicted RBP12.35□□□□□ -0.43
COL6A1-207ENST00000612273 C12orf57Q99622 126 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
COL6A1-207ENST00000612273 WIF1Q9Y5W5 379 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 NXPH3O95157 252 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 IGHV3-9P01782 118 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 GLB1P16278 677 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 PTGER4P35408 488 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 OR10Z1Q8NGY1 313 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 MRPL24Q96A35 216 aaKnown RBP12.35□□□□□ -0.43
COL6A1-207ENST00000612273 MTCP1P56278 107 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 TAS2R31P59538 309 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 CYCSP99999 105 aaKnown RBP12.34□□□□□ -0.43
COL6A1-207ENST00000612273 SECTM1Q8WVN6 248 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 LYZL4Q96KX0 146 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 NECAB3Q96P71 396 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-207ENST00000612273 FBXO9Q9UK97 447 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-207ENST00000612273 AMDHD2Q9Y303 409 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 EML6Q6ZMW3 1958 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 MTRF1O75570 445 aaKnown RBP12.34□□□□□ -0.43
COL6A1-207ENST00000612273 SFTA3P0C7M3 94 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 OR8U9P0C7N5 309 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 ZP4Q12836 540 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 FAM76BQ5HYJ3 339 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 Q6ZRG5 221 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 SULF2Q8IWU5 870 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 OR8U1Q8NH10 309 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 RXFP4Q8TDU9 374 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF576Q9H609 170 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 LPAR3Q9UBY5 353 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 RFNGQ9Y644 331 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 ASPMQ8IZT6 3477 aa12.34□□□□□ -0.43
COL6A1-207ENST00000612273 DBX1A6NMT0 343 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 K7EPK0 472 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 MFNGO00587 321 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 BCAT2O15382 392 aaPredicted RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 IGLV3-19P01714 112 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 SNRNP70P08621 437 aaKnown RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 FAM157CP0CG43 387 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 CSNK1A1P48729 337 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 HFEQ30201 348 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 PRSS54Q6PEW0 395 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 OGFOD3Q6PK18 319 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 PLXDC2Q6UX71 529 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 FAM71E2Q8N5Q1 922 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 SUMF1Q8NBK3 374 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 HSD17B11Q8NBQ5 300 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 NFAM1Q8NET5 270 aaPredicted RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 SULT4A1Q9BR01 284 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 SRPK3Q9UPE1 567 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 CSTBP04080 98 aaKnown RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 GLAP06280 429 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 GSTP1P09211 210 aaKnown RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 FCGR2CP31995 323 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 FLI1Q01543 452 aaPredicted RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 PJVKQ0ZLH3 352 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 SNAI3Q3KNW1 292 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 PEG10Q86TG7 708 aaKnown RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 PLPP5Q8NEB5 264 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 OR5L1Q8NGL2 311 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 C2orf50Q96LR7 162 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 RASL10BQ96S79 203 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 PECRQ9BY49 303 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 NMES1Q9C002 83 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 SLC26A1Q9H2B4 701 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 ESRP2Q9H6T0 727 aaKnown RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 RPS10P5Q9NQ39 176 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 WNT16Q9UBV4 365 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 ZFAND5O76080 213 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 RPL12P30050 165 aaKnown RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 MST1LQ2TV78 715 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 C5orf46Q6UWT4 87 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 MEX3BQ6ZN04 569 aaKnown RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 C17orf82Q86X59 251 aaPredicted RBP12.33□□□□□ -0.44
COL6A1-207ENST00000612273 MISPQ8IVT2 679 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 ARRDC1Q8N5I2 433 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 SLC30A7Q8NEW0 376 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 ASB13Q8WXK3 278 aa12.33□□□□□ -0.44
COL6A1-207ENST00000612273 ZNF98A6NK75 572 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 RNASEK-C17orf49H0YIS7 233 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 M0R036 132 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 PRH1P02810 166 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 HLA-GP17693 338 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 C9orf135Q5VTT2 229 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 RHBDD2Q6NTF9 364 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 DOK3Q7L591 496 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms