RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MBD6Q96DN6 1003 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 FBXO17Q96EF6 278 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 S100A16Q96FQ6 103 aaKnown RBP7.61□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF416Q9BWM5 594 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 FOXJ3Q9UPW0 622 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 RBMX2Q9Y388 322 aaKnown RBP7.61□□□□□ -1.19
SMAD4-217ENST00000611848 SPEF1Q9Y4P9 236 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 LRP12Q9Y561 859 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 NUBP2Q9Y5Y2 271 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 R4GMQ9 66 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 CSMD2Q7Z408 3487 aa7.61□□□□□ -1.19
SMAD4-217ENST00000611848 C7orf66A4D0T2 115 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 CENPXA8MT69 81 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 VSTM5A8MXK1 200 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 GABARAPH6UMI1 98 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ISG15P05161 165 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 DANCRP0C864 163 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 COX5BP10606 129 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF35P13682 527 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ARSBP15848 533 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 APOBEC3AP31941 199 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 DCTDP32321 178 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 APLNRP35414 380 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 PRRC2AP48634 2157 aaKnown RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 NKX2-5P52952 324 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ART1P52961 327 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 CLDN12P56749 244 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 MRPS10P82664 201 aaKnown RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 PSG4Q00888 419 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 TBC1D28Q2M2D7 210 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ZFP69Q49AA0 526 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 PABPC1L2AQ5JQF8 200 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ASPHD2Q6ICH7 369 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 FAM166AQ6J272 317 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 KRT74Q7RTS7 529 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 PRSS45Q7RTY3 260 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 DTX2Q86UW9 622 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 FBXL14Q8N1E6 418 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 SLC30A7Q8NEW0 376 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 NUP37Q8NFH4 326 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 OR10H5Q8NGA6 315 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 SYNPRQ8TBG9 265 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 C15orf40Q8WUR7 153 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 TMEM171Q8WVE6 324 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 RNF133Q8WVZ7 376 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 RNF170Q96K19 258 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 CCL19Q99731 98 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 TRAF4Q9BUZ4 470 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 OR2H1Q9GZK4 316 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 DPAGT1Q9H3H5 408 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 CDH20Q9HBT6 801 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 EMC7Q9NPA0 242 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 BEX4Q9NWD9 120 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 COPZ2Q9P299 210 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 STEAP1Q9UHE8 339 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 LAMP3Q9UQV4 416 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 SLC22A13Q9Y226 551 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 MRPS7Q9Y2R9 242 aaKnown RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ANXA2P2A6NMY6 339 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 A8MV72 311 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ATP6V1G1O75348 118 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 MAS1P04201 325 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ANXA2P07355 339 aaKnown RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 IGFBP3P17936 291 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 FSTP19883 344 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ACHEP22303 614 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 STOMP27105 288 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 GDNFP39905 211 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 FABP6P51161 128 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 RAG2P55895 527 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 RRAS2P62070 204 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 GALK2Q01415 458 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 IFITM2Q01629 132 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 HGFACQ04756 655 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 DCXRQ7Z4W1 244 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 IZUMO1Q8IYV9 350 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 MUC15Q8N387 334 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 CPEB3Q8NE35 698 aaKnown RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 DNAAF1Q8NEP3 725 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 GJC3Q8NFK1 279 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 TSEN15Q8WW01 171 aaKnown RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 IGFBPL1Q8WX77 278 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 PPP1R14AQ96A00 147 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 FAM210AQ96ND0 272 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 WNT5BQ9H1J7 359 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF442Q9H7R0 627 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 RANGRFQ9HD47 186 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-217ENST00000611848 G6PC2Q9NQR9 355 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 CA10Q9NS85 328 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 CBLN4Q9NTU7 201 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 CYB5R1Q9UHQ9 305 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 OR52A1Q9UKL2 312 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 DHDHQ9UQ10 334 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 POLR1DQ9Y2S0 133 aa7.6□□□□□ -1.19
SMAD4-217ENST00000611848 A0A0A6YYJ9 748 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 SLC17A2O00624 439 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 RGS13O14921 159 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 SGCEO43556 437 aa7.59□□□□□ -1.19
SMAD4-217ENST00000611848 ECDO95905 644 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms