RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 OPA3Q9H6K4 179 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 OCIAD1Q9NX40 245 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 MIA3Q5JRA6 1907 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 WNK3Q9BYP7 1800 aa12.71□□□□□ -0.38
PCDHB16-201ENST00000609684 A0A1W2PQD3 144 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 RFPL4AA6NLU0 287 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 RFPL4AL1F8VTS6 287 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 OGG1O15527 345 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 SCAND1P57086 179 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 C1orf210Q8IVY1 113 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 BTBD17A6NE02 478 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 TMEM123Q8N131 208 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 MUC20Q8N307 709 aaPredicted RBP12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 CNTD2Q9H8S5 307 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 GNG13Q9P2W3 67 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 ICAM5Q9UMF0 924 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 DTX4Q9Y2E6 619 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 IGKV1-8A0A0C4DH67 115 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 A0A1W2PPH5 198 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 MKRN2OSH3BPM6 223 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 FPR2P25090 351 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 RAG2P55895 527 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 DHRS2Q13268 280 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 BATFQ16520 125 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 SP6Q3SY56 376 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 PABPC1L2AQ5JQF8 200 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 C11orf87Q6NUJ2 197 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 LIN37Q96GY3 246 aaPredicted RBP12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 V9GYH0 126 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 MT-ND4LP03901 98 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 PATE4P0C8F1 98 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 CT45A6P0DMU7 189 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 CT45A5P0DMU8 189 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 CT45A7P0DMV0 189 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 SRD5A2P31213 254 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 GALNSP34059 522 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 OR3A4PP47883 348 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 NOVA1P51513 510 aaKnown RBP12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 DHODHQ02127 395 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 SKP2Q13309 424 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 SSPNQ14714 243 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 ZNF766Q5HY98 468 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 WDR74Q6RFH5 385 aaPredicted RBP12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 IL34Q6ZMJ4 242 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 ZDHHC22Q8N966 263 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 C10orf90Q96M02 699 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 KCNK15Q9H427 330 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 FAM186AA6NE01 2351 aa12.7□□□□□ -0.38
PCDHB16-201ENST00000609684 ZFC3H1O60293 1989 aaKnown RBP12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 ZNF891A8MT65 544 aaPredicted RBP12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 HSBP1L1C9JCN9 74 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 FOXS1O43638 330 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 IGHV4-34P06331 123 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 ACSM4P0C7M7 580 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 PXDC1Q5TGL8 231 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 CDC20BQ86Y33 519 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 ASB10Q8WXI3 467 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 STRAPQ9Y3F4 350 aaKnown RBP12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 UMAD1C9J7I0 102 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 MEOX1P50221 254 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 TSEN54Q7Z6J9 526 aaKnown RBP12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 SLC38A6Q8IZM9 456 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 OR10P1Q8NGE3 313 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 TUBG2Q9NRH3 451 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 QPCTLQ9NXS2 382 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 TDRD15B5MCY1 1934 aaKnown RBP12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 TNS1Q9HBL0 1735 aaKnown RBP12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 TRAV17A0A0B4J275 112 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 DEFA4P12838 97 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 GNG3P63215 75 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 TAGLNQ01995 201 aaKnown RBP12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 PPP1R1AQ13522 171 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 PLA1AQ53H76 456 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 LRRTM1Q86UE6 522 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 THNSL2Q86YJ6 484 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 CPEB3Q8NE35 698 aaKnown RBP12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 MIXL1Q9H2W2 232 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 PPP1R14DQ9NXH3 145 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 FRRS1LQ9P0K9 344 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 OR2M5A3KFT3 312 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 DCTN6O00399 190 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 CD37P11049 281 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 SPEM2Q0P670 501 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 SMIM21Q3B7S5 101 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 OR2T2Q6IF00 324 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 C6orf201Q7Z4U5 140 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 CHST6Q9GZX3 395 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 LHX9Q9NQ69 397 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 MED9Q9NWA0 146 aa12.69□□□□□ -0.38
PCDHB16-201ENST00000609684 ARPC4-TTLL3A0A0A6YYG9 625 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 A0A1W2PR80 420 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 F6UZH7 168 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 H3BP45 60 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 CCL4P13236 92 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 FXNQ16595 210 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 RGS7BPQ6MZT1 257 aaPredicted RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 ADGRG3Q86Y34 549 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 OR6X1Q8NH79 312 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms