RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ORC2Q13416 577 aaPredicted RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 KRR1Q13601 381 aaKnown RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 GGTLC2Q14390 218 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 OR7A5Q15622 319 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 VAMP3Q15836 100 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF726P1Q15940 193 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 TRMT5Q32P41 509 aaKnown RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ADNP2Q6IQ32 1131 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 RWDD4Q6NW29 188 aaKnown RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF544Q6NX49 715 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 CYHR1Q6ZMK1 362 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 P2RY8Q86VZ1 359 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 TGIF2LYQ8IUE0 185 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 STX19Q8N4C7 294 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 EEF1AKMT3Q96AZ1 226 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 FOPNLQ96NB1 174 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 RASL11BQ9BPW5 248 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 MND1Q9BWT6 205 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 GABARAPL3Q9BY60 117 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM38AQ9H6F2 299 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF430Q9H8G1 570 aaPredicted RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 EML4Q9HC35 981 aaKnown RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ACP6Q9NPH0 428 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 OR2S2Q9NQN1 319 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 CLN6Q9NWW5 311 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 SMPXQ9UHP9 88 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ZNF225Q9UK10 706 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 PYCARDQ9ULZ3 195 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 FLVCR2Q9UPI3 526 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 PSG11Q9UQ72 335 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 YARS2Q9Y2Z4 477 aaKnown RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 POLR3HQ9Y535 204 aaPredicted RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 NAV1Q8NEY1 1877 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 CASZ1Q86V15 1759 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 A0A1B0GV72 72 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM213A2RRL7 107 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 C9orf170A2RU37 121 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 HIDE1A8MVS5 230 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 RNASEK-C17orf49H0YIS7 233 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 MKRN2OSH3BPM6 223 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 PRMT5O14744 637 aaPredicted RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 EMC8O43402 210 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 NPIPB7O75200 414 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 HSBP1O75506 76 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 TNFSF13O75888 250 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 AQP8O94778 261 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 FARS2O95363 451 aaKnown RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 FAM107AO95990 144 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 PCCAP05165 728 aaPredicted RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 DCNP07585 359 aaKnown RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 RD3LP0DJH9 198 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 SMIM10L1P0DMW3 83 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 OGNP20774 298 aaKnown RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 ELK4P28324 431 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 HTR1EP28566 365 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 CA5AP35218 305 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 HRH1P35367 487 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 CEACAM3P40198 252 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 RPL35P42766 123 aaKnown RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 GPR1P46091 355 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 AKR1D1P51857 326 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 ATP5J2P56134 94 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 CCL7P80098 99 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 LCN2P80188 198 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 MXD1Q05195 221 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 REG3AQ06141 175 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 HERPUD1Q15011 391 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 RPEL1Q2QD12 228 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM249Q2WGJ8 235 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 ZBED5Q49AG3 693 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 COX19Q49B96 90 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 PIGGQ5H8A4 983 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 COA6Q5JTJ3 125 aaKnown RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 IL34Q6ZMJ4 242 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 HS3ST5Q8IZT8 346 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 RIBC1Q8N443 379 aaPredicted RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 LRRC18Q8N456 261 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 C20orf203Q8NBC4 194 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 OR9A2Q8NGT5 310 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 RNF133Q8WVZ7 376 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 DCPSQ96C86 337 aaKnown RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 AURKBQ96GD4 344 aaPredicted RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 SMIM10Q96HG1 83 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 PPP3R2Q96LZ3 170 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 BIRC8Q96P09 236 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 SERPINI1Q99574 410 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 NAPGQ99747 312 aaPredicted RBP3.62□□□□□ -1.83
LINC00397-202ENST00000606785 PYGO2Q9BRQ0 406 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 KIR3DX1Q9H7L2 352 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 WDR54Q9H977 334 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 PRSS16Q9NQE7 514 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 BIN3Q9NQY0 253 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 FBXL3Q9UKT7 428 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 DNMBPQ6XZF7 1577 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 CEMIPQ8WUJ3 1361 aa3.62□□□□□ -1.83
LINC00397-202ENST00000606785 CAMSAP2Q08AD1 1489 aa3.61□□□□□ -1.83
LINC00397-202ENST00000606785 AKAP12Q02952 1782 aa3.61□□□□□ -1.83
LINC00397-202ENST00000606785 TSPAN11A1L157 253 aa3.61□□□□□ -1.83
LINC00397-202ENST00000606785 PRSS37A4D1T9 235 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms