RNA–Protein interactions for RNA: ENST00000606454.1

AL390728.4-204, humanhuman

TSL 3

Gene AL390728.4, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-204ENST00000606454 HOXA4Q00056 320 aaPredicted RBP12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 SMN1Q16637 294 aaKnown RBP12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 KRTAP21-3Q3LHN1 58 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 CLVS2Q5SYC1 327 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 DCAF12L2Q5VW00 463 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 PLCXD3Q63HM9 321 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 FDX2Q6P4F2 183 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 WDR82Q6UXN9 313 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 SYS1Q8N2H4 156 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 SCCPDHQ8NBX0 429 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 CCDC54Q8NEL0 328 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 OR4M2Q8NGB6 313 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 OR8B3Q8NGG8 313 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 OR52I1Q8NGK6 324 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 OR2G2Q8NGZ5 317 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 CNIH3Q8TBE1 160 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 RPL3LQ92901 407 aaKnown RBP12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 RNF166Q96A37 237 aaPredicted RBP12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 C4orf36Q96KX1 117 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 OR8B2Q96RD0 313 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 SSBP3Q9BWW4 388 aaPredicted RBP12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 FGF23Q9GZV9 251 aaPredicted RBP12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 METTL17Q9H7H0 456 aaPredicted RBP12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 ERVK13-1Q9NX77 482 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 HSPE1-MOB4S4R3N1 261 aa12.7□□□□□ -0.38
AL390728.4-204ENST00000606454 SONP18583 2426 aaKnown RBP12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 IRGMA1A4Y4 181 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 A8MXK9 166 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 ZNF732B4DXR9 585 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 J3QLI3 93 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 NDUFA2O43678 99 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 IFNA2P01563 188 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 HTR1AP08908 422 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 ZNF12P17014 697 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 SRP14P37108 136 aaKnown RBP12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 KIR3DL2P43630 455 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 GNB2P62879 340 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 TMEM244Q5VVB8 128 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 TMEM42Q69YG0 159 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 PRIMA1Q86XR5 153 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 OR10Z1Q8NGY1 313 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 OR51I2Q9H344 312 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 PLEKHA1Q9HB21 404 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 FGF20Q9NP95 211 aaPredicted RBP12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 FRRS1LQ9P0K9 344 aa12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 POLR3KQ9Y2Y1 108 aaPredicted RBP12.69□□□□□ -0.38
AL390728.4-204ENST00000606454 A6NIN4 97 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 H0YHG0 523 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 H3BSH0 61 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 PHF1O43189 567 aaPredicted RBP12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 MUC1P15941 1255 aaPredicted RBP12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 EGR1P18146 543 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 DCKP27707 260 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 PITPNBP48739 271 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 CCR9P51686 369 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 MRPL28Q13084 256 aaKnown RBP12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 MICBQ29980 383 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 DMRTC1Q5HYR2 192 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 TEX36Q5VZQ5 186 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 LYPD2Q6UXB3 125 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 RDH10Q8IZV5 341 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 C8orf59Q8N0T1 100 aaPredicted RBP12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 TEX29Q8N6K0 151 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 PELI1Q96FA3 418 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 ZNF649Q9BS31 505 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 JAM3Q9BX67 310 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 GPR173Q9NS66 373 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 OR5V1Q9UGF6 321 aa12.68□□□□□ -0.38
AL390728.4-204ENST00000606454 MALRD1Q5VYJ5 2156 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.67□□□□□ -0.383e-12■■■■■ 73.5
AL390728.4-204ENST00000606454 ABCA2Q9BZC7 2435 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 IGHV3OR15-7A0A075B7D8 119 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 LOC107986453A0A1B0GWG9 222 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 ANKRD61A6NGH8 418 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 KIAA1324LA8MWY0 1029 aaPredicted RBP12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 SRRM5B3KS81 715 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 TNFRSF13BO14836 293 aaPredicted RBP12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 SERPINA3P01011 423 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 GYPAP02724 150 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 ISG15P05161 165 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 GNAO1P09471 354 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 NANOS3P60323 173 aaKnown RBP12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 FAM90A1Q86YD7 464 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 ZNF671Q8TAW3 534 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 C12orf43Q96C57 262 aaKnown RBP12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 C10orf35Q96D05 121 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 TMPRSS13Q9BYE2 586 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 C7orf69Q9H7B7 122 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 ISG20L2Q9H9L3 353 aaKnown RBP12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 MMP26Q9NRE1 261 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 ERVK-18Q9QC07 812 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 CLN8Q9UBY8 286 aa12.67□□□□□ -0.38
AL390728.4-204ENST00000606454 TRAPPC2LH3BP13 241 aa12.66□□□□□ -0.38
AL390728.4-204ENST00000606454 ADAM20O43506 726 aa12.66□□□□□ -0.38
AL390728.4-204ENST00000606454 LIMS3P0CW19 117 aa12.66□□□□□ -0.38
AL390728.4-204ENST00000606454 LIMS4P0CW20 117 aa12.66□□□□□ -0.38
AL390728.4-204ENST00000606454 NPY4RP50391 375 aa12.66□□□□□ -0.38
AL390728.4-204ENST00000606454 GBX2P52951 348 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms