RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PLCXD3Q63HM9 321 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 RBMS3Q6XE24 437 aaKnown RBP9.63□□□□□ -0.87
CCDC12-209ENST00000604164 C1orf229Q6ZS94 237 aaPredicted RBP9.63□□□□□ -0.87
CCDC12-209ENST00000604164 MOB3CQ70IA8 216 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 WDR86Q86TI4 376 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 FAM90A1Q86YD7 464 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 ZNF573Q86YE8 665 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 C11orf53Q8IXP5 236 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 SCCPDHQ8NBX0 429 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 ZNF555Q8NEP9 628 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 C10orf35Q96D05 121 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 RNFT2Q96EX2 444 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 NUDT16L1Q9BRJ7 211 aaKnown RBP9.63□□□□□ -0.87
CCDC12-209ENST00000604164 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.63□□□□□ -0.87
CCDC12-209ENST00000604164 GNG8Q9UK08 70 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 NUP50Q9UKX7 468 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 V9GYS6 101 aa9.63□□□□□ -0.87
CCDC12-209ENST00000604164 LOC100130705A0A1B0GUX0 176 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 ZNF732B4DXR9 585 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 E9PQ18 207 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 TRIM77I1YAP6 450 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 TNFRSF13BO14836 293 aaPredicted RBP9.62□□□□□ -0.87
CCDC12-209ENST00000604164 SYT7O43581 403 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 ENTPD6O75354 484 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 SERPINA3P01011 423 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 FSHBP01225 129 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 UBCP0CG48 685 aaKnown RBP9.62□□□□□ -0.87
CCDC12-209ENST00000604164 FAHP16930 419 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 CCL1P22362 96 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 RBMXP38159 391 aaKnown RBP9.62□□□□□ -0.87
CCDC12-209ENST00000604164 PAX2Q02962 417 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 LRRC10Q5BKY1 277 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 LYPD2Q6UXB3 125 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 ZNF841Q6ZN19 808 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 Q6ZSR3 168 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 CATSPERDQ86XM0 798 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 ACBD7Q8N6N7 88 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 C19orf18Q8NEA5 215 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 HAVCR2Q8TDQ0 301 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 HPSE2Q8WWQ2 592 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 RPL3LQ92901 407 aaKnown RBP9.62□□□□□ -0.87
CCDC12-209ENST00000604164 MED30Q96HR3 178 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 DMRTB1Q96MA1 342 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 MBOAT4Q96T53 435 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 OR51I2Q9H344 312 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 INPP5EQ9NRR6 644 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 SMPD3Q9NY59 655 aaPredicted RBP9.62□□□□□ -0.87
CCDC12-209ENST00000604164 RASL12Q9NYN1 266 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 SLC22A13Q9Y226 551 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 POLDIP2Q9Y2S7 368 aa9.62□□□□□ -0.87
CCDC12-209ENST00000604164 SLC16A6O15403 523 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 MAGEB4O15481 346 aaPredicted RBP9.61□□□□□ -0.87
CCDC12-209ENST00000604164 NDUFB3O43676 98 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 GATBO75879 557 aaKnown RBP9.61□□□□□ -0.87
CCDC12-209ENST00000604164 APOL3O95236 402 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 FADS2O95864 444 aaKnown RBP9.61□□□□□ -0.87
CCDC12-209ENST00000604164 HILS1P60008 231 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 MRPL28Q13084 256 aaKnown RBP9.61□□□□□ -0.87
CCDC12-209ENST00000604164 CEP78Q5JTW2 689 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 ATPAF1Q5TC12 328 aaPredicted RBP9.61□□□□□ -0.87
CCDC12-209ENST00000604164 TMEM244Q5VVB8 128 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 TMEM42Q69YG0 159 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 SSX6Q7RTT6 188 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 PACRGLQ8N7B6 248 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 RORBQ92753 470 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 TMIGD2Q96BF3 282 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 UPRTQ96BW1 309 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 C19orf24Q9BVV8 132 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 MS4A7Q9GZW8 240 aaPredicted RBP9.61□□□□□ -0.87
CCDC12-209ENST00000604164 FAM118AQ9NWS6 357 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 SLC7A11Q9UPY5 501 aa9.61□□□□□ -0.87
CCDC12-209ENST00000604164 EXOGQ9Y2C4 368 aaKnown RBP9.61□□□□□ -0.87
CCDC12-209ENST00000604164 RPL36Q9Y3U8 105 aaKnown RBP9.61□□□□□ -0.87
CCDC12-209ENST00000604164 IGHV3OR15-7A0A075B7D8 119 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 IRGMA1A4Y4 181 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 ANKRD61A6NGH8 418 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 J3QT63 122 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 P2RY10O00398 339 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 DVL1O14640 695 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 EGR1P18146 543 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 GLRA1P23415 457 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 ZNF85Q03923 595 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 RAB40BQ12829 278 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 SMIM21Q3B7S5 101 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 KRTAP24-1Q3LI83 254 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 CDONQ4KMG0 1287 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 KLHL22Q53GT1 634 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 WDR38Q5JTN6 314 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 GPR157Q5UAW9 335 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 METTL11BQ5VVY1 283 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 STUMQ69YW2 141 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 FDX2Q6P4F2 183 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 HAGHLQ6PII5 290 aaPredicted RBP9.6□□□□□ -0.87
CCDC12-209ENST00000604164 PHC2Q8IXK0 858 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 ENTHD1Q8IYW4 607 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 CMTM4Q8IZR5 234 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 OR14K1Q8NGZ2 314 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 RHOXF1Q8NHV9 184 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 PP6455Q8WZ26 134 aa9.6□□□□□ -0.87
CCDC12-209ENST00000604164 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms