RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 PRRT1Q99946 306 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 RNF126Q9BV68 326 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 SNHG12Q9BXW3 62 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 LYRM4Q9HD34 91 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 BCL2L10Q9HD36 194 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 RARRES3Q9UL19 164 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 LDLRAD4O15165 306 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 SLC2A1P11166 492 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 TUBG1P23258 451 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 SLC6A6P31641 620 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 PMELP40967 661 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 SYS1Q8N2H4 156 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 ZNF619Q8N2I2 560 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 MARCH1Q8TCQ1 289 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 ZNF587Q96SQ5 575 aaPredicted RBP13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 PBDC1Q9BVG4 233 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 VN1R1Q9GZP7 353 aa13.65□□□□□ -0.23
PPFIA3-206ENST00000602655 C11orf98E9PRG8 122 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 DLEU1O43261 78 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 SCGNO76038 276 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 CELA2AP08217 269 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 TACSTD2P09758 323 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 JMJD7P0C870 316 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 HTR2CP28335 458 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 IL12BP29460 328 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 WDR88Q6ZMY6 472 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 OR13C8Q8NGS7 320 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 TSSK2Q96PF2 358 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 NUDT9Q9BW91 350 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 CGGBP1Q9UFW8 167 aaPredicted RBP13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 LSM5Q9Y4Y9 91 aaKnown RBP13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 LILRA5A6NI73 299 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 CXCL1P09341 107 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 ZBTB25P24278 435 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 RPUSD3Q6P087 351 aaKnown RBP13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 METTL21AQ8WXB1 218 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 FAM46BQ96A09 425 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 MVB12AQ96EY5 273 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 SLC35B3Q9H1N7 401 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 C19orf12Q9NSK7 152 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 PILRBQ9UKJ0 227 aa13.64□□□□□ -0.23
PPFIA3-206ENST00000602655 C4orf47A7E2U8 309 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 M0R296 226 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 AHSA1O95433 338 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 TRA2AQ13595 282 aaKnown RBP eCLIP13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 MAJINQ3KP22 176 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 SLC35D3Q5M8T2 416 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 HSD17B11Q8NBQ5 300 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 ELOVL1Q9BW60 279 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 C1orf198Q9H425 327 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 MPDZO75970 2070 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 GLCEO94923 617 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 SCGB1D1O95968 90 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 NKAIN1Q4KMZ8 207 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 PRAMEF20Q5VT98 475 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 BTNL8Q6UX41 500 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 FAM213BQ8TBF2 198 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 SLC2A12Q8TD20 617 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 SAP25Q8TEE9 199 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 NOL4LQ96MY1 436 aaPredicted RBP13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 SPTAN1Q13813 2472 aaKnown RBP13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 H7C1C5 153 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 PGA4P0DJD7 388 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 PGA5P0DJD9 388 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 LCN6P62502 163 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 MGAT2Q10469 447 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 MRPL41Q8IXM3 137 aaKnown RBP13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 PAQR4Q8N4S7 273 aaPredicted RBP13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 BCORP1Q8N888 145 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 APCDD1LQ8NCL9 501 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 ZNF417Q8TAU3 575 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 Q8WTZ3 238 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 DOCK7Q96N67 2140 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 COPS7AQ9UBW8 275 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 SIGLEC7Q9Y286 467 aa13.63□□□□□ -0.23
PPFIA3-206ENST00000602655 A0A1B0GWA3 101 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 A0A1W2PPC1 479 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 K7EPK0 472 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 PGA3P0DJD8 388 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 PPICP45877 212 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 SULT1A2P50226 295 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 GLO1Q04760 184 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 PLCXD2Q0VAA5 305 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 CD226Q15762 336 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 SLC22A6Q4U2R8 563 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 UNQ9370/PRO34162Q6UXP9 181 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 P4HA3Q7Z4N8 544 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 C17orf78Q8N4C9 275 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 FAM71E2Q8N5Q1 922 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 GPX8Q8TED1 209 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 FRZBQ92765 325 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 ARHGDIGQ99819 225 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 TBL1XR1Q9BZK7 514 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 PRODH2Q9UF12 536 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 IGHV5-10-1A0A0J9YXX1 117 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 HLA-DQA2P01906 255 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 F13BP05160 661 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 NPY4RP50391 375 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 GLYATL3Q5SZD4 288 aa13.62□□□□□ -0.23
PPFIA3-206ENST00000602655 MAML2Q8IZL2 1156 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms