RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 RNASEK-C17orf49H0YIS7 233 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 NPFFO15130 113 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 AKR7A2O43488 359 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 ACAA1P09110 424 aaPredicted RBP13.94□□□□□ -0.18
SCAF1-204ENST00000601038 HOXB6P17509 224 aaKnown RBP13.94□□□□□ -0.18
SCAF1-204ENST00000601038 ALOX5APP20292 161 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 CAV3P56539 151 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 PROK1P58294 105 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 TAF9Q16594 264 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 MIDNQ504T8 468 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 AQP12AQ8IXF9 295 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 ZDHHC23Q8IYP9 409 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 H1FXQ92522 213 aaKnown RBP13.94□□□□□ -0.18
SCAF1-204ENST00000601038 TNFRSF14Q92956 283 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 CLPTM1LQ96KA5 538 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 GAFA1Q96PS6 74 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 HIST1H2AAQ96QV6 131 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 SEMA6AQ9H2E6 1030 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 MMP27Q9H306 513 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 ZNRD1Q9P1U0 126 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 SLC25A10Q9UBX3 287 aaPredicted RBP13.94□□□□□ -0.18
SCAF1-204ENST00000601038 KLHDC2Q9Y2U9 406 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 LRP12Q9Y561 859 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 WNK1Q9H4A3 2382 aa13.94□□□□□ -0.18
SCAF1-204ENST00000601038 BTBD17A6NE02 478 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 ACOD1A6NK06 481 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 SIGLEC5O15389 551 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 SLC2A5P22732 501 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 MAP2K3P46734 347 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 DGUOKQ16854 277 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 ASPHD2Q6ICH7 369 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 Q6ZSV7 163 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 KRT77Q7Z794 578 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 PAPD5Q8NDF8 572 aaKnown RBP13.93□□□□□ -0.18
SCAF1-204ENST00000601038 BBS1Q8NFJ9 593 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 THTPAQ9BU02 230 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 TEX12Q9BXU0 123 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 C16orf95Q9H693 158 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 NLKQ9UBE8 527 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 LAMP5Q9UJQ1 280 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 VPREB3Q9UKI3 123 aa13.93□□□□□ -0.18
SCAF1-204ENST00000601038 A0A0U1RQV5 110 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 ZNF816-ZNF321PA0A0X1KG74 233 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 OR2AT4A6NND4 320 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 M0R1W7 72 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 E2F6O75461 281 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 FAM107AO95990 144 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 TFF1P04155 84 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 ANXA8P13928 327 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 NDUFB7P17568 137 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 PRKACGP22612 351 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 GLRA1P23415 457 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 TGFBR2P37173 567 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 GPM6AP51674 278 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 UBE2E1P51965 193 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 DLX1P56177 255 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 RPS7P62081 194 aaKnown RBP13.92□□□□□ -0.18
SCAF1-204ENST00000601038 GNG3P63215 75 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 PRB3Q04118 309 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-204ENST00000601038 CEACAM21Q3KPI0 293 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 NCR3LG1Q68D85 454 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 DHRS7BQ6IAN0 325 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-204ENST00000601038 DEGS2Q6QHC5 323 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 HS3ST5Q8IZT8 346 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 CCDC197Q8NCU1 140 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 FAM81AQ8TBF8 368 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 RBM4BQ9BQ04 359 aaKnown RBP13.92□□□□□ -0.18
SCAF1-204ENST00000601038 YIPF3Q9GZM5 350 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 OR51I2Q9H344 312 aa13.92□□□□□ -0.18
SCAF1-204ENST00000601038 METTL8Q9H825 291 aaKnown RBP13.92□□□□□ -0.18
SCAF1-204ENST00000601038 TMEM269A0A1B0GVZ9 245 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 A0A1W2PRD5 423 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 A0A1W2PRF3 423 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 A0A1W2PRM7 423 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 ZNF732B4DXR9 585 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 RHBDL1O75783 438 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 TSPAN9O75954 239 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 PAHP00439 452 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 HCCSP53701 268 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 ACSM1Q08AH1 577 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 KLRD1Q13241 179 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 BLMHQ13867 455 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 KCTD18Q6PI47 426 aaPredicted RBP13.91□□□□□ -0.18
SCAF1-204ENST00000601038 OR5A2Q8NGI9 324 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 OR5R1Q8NH85 324 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 ZNF671Q8TAW3 534 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 SLC25A19Q9HC21 320 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 FAM206AQ9NX38 181 aa13.91□□□□□ -0.18
SCAF1-204ENST00000601038 IGKV1D-17A0A075B6S4 117 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 A0A1W2PQ09 198 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 MEIOCA2RUB1 952 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 PSG2P11465 335 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 ATP6V1B1P15313 513 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 SAA4P35542 130 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 GABRA2P47869 451 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 APOFQ13790 326 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 CEP78Q5JTW2 689 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 TMEM236Q5W0B7 351 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 TRPM8Q7Z2W7 1104 aa13.9□□□□□ -0.18
SCAF1-204ENST00000601038 ZNRF1Q8ND25 227 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms