RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 RAET1LQ5VY80 246 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 PRSS54Q6PEW0 395 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 WNT2BQ93097 391 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 SCGB3A2Q96PL1 93 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 AIFM2Q9BRQ8 373 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 SLC6A15Q9H2J7 730 aa17.73■□□□□ 0.43
SHKBP1-225ENST00000600733 HOXB5P09067 269 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 CCL3P10147 92 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 THBS4P35443 961 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 PDSS1Q5T2R2 415 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 ZNF585AQ6P3V2 769 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 GALNTL5Q7Z4T8 443 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 C6orf201Q7Z4U5 140 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 ZNF837Q96EG3 531 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 JSRP1Q96MG2 331 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 TSNAXQ99598 290 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 TMEM100Q9NV29 134 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 GSKIPQ9P0R6 139 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 V9GYS6 101 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 A0A0U1RQV5 110 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 ALDH3B1P43353 468 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 NAAAQ02083 359 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 GUCA2BQ16661 112 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 PLEKHN1Q494U1 663 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 CHRFAM7AQ494W8 412 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 C10orf128Q5T292 105 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 CLRN3Q8NCR9 226 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 TMEM54Q969K7 222 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 SHDQ96IW2 340 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 CHST5Q9GZS9 411 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 OR2S2Q9NQN1 319 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 GHRLQ9UBU3 117 aa17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 MCTS1Q9ULC4 181 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-225ENST00000600733 NPIPA2E9PIF3 369 aa17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 NPIPA3F8WFD2 350 aa17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 CD79AP11912 226 aa17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 FKBP2P26885 142 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 SAP25Q8TEE9 199 aa17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 RNF141Q8WVD5 230 aa17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 ZNF775Q96BV0 537 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 S100A13Q99584 98 aa17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 HDHD3Q9BSH5 251 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 ADAT1Q9BUB4 502 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-225ENST00000600733 M0R135 149 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 LYL1P12980 280 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 GABRR1P24046 479 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 SNAI3Q3KNW1 292 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 PUSL1Q8N0Z8 303 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 TMEM123Q8N131 208 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 HAS2Q92819 552 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 ZNF799Q96GE5 643 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 NECAB3Q96P71 396 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 ACKR4Q9NPB9 350 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 PLEK2Q9NYT0 353 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 PMS2P1A4D2B8 440 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 FAM157CP0CG43 387 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 NR2C1P13056 603 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 S100A10P60903 97 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 SLC16A14Q7RTX9 510 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 FOXRED2Q8IWF2 684 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 POC1AQ8NBT0 407 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 OR9K2Q8NGE7 335 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 PP6455Q8WZ26 134 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 C2orf50Q96LR7 162 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 PROK2Q9HC23 129 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 WNT16Q9UBV4 365 aa17.7■□□□□ 0.42
SHKBP1-225ENST00000600733 DHRS7CA6NNS2 312 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 SERPINE3A8MV23 424 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 DHHO43323 396 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 CPT2P23786 658 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 PTGER4P35408 488 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 PRSS12P56730 875 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 TMEM88Q6PEY1 159 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 RHBDD1Q8TEB9 315 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 ARL11Q969Q4 196 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 FBXO17Q96EF6 278 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 AQP10Q96PS8 301 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 TM2D1Q9BX74 207 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 TMEM231Q9H6L2 316 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 IGHV1-45A0A0A0MS14 117 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 MASP2O00187 686 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 ZIC3O60481 467 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 UMODP07911 640 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 SFTPBP07988 381 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 LIFP15018 202 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 OTX1P32242 354 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 LYSMD4Q5XG99 296 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 OR4A4PQ8NGN8 299 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 EMG1Q92979 244 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 PIGQQ9BRB3 760 aa17.69■□□□□ 0.42
SHKBP1-225ENST00000600733 A0A087WZY1 265 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 CSTBP04080 98 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 HIST1H3AP68431 136 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 IL15RAQ13261 267 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 PABPC1L2AQ5JQF8 200 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 HIST2H3PS2Q5TEC6 136 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 FOXL2NBQ6ZUU3 175 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 HIST2H3AQ71DI3 136 aa17.68■□□□□ 0.42
SHKBP1-225ENST00000600733 OR2AE1Q8NHA4 323 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms