RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 TEX50A0A1B0GTY4 177 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 SERPINE3A8MV23 424 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 SLC17A2O00624 439 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 KCNJ3P48549 501 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 TOMM34Q15785 309 aaPredicted RBP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 TCTN1Q2MV58 587 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 MRGPREQ86SM8 312 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 OR2Z1Q8NG97 314 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 OR1L4Q8NGR5 311 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 FBXO17Q96EF6 278 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 AAMDCQ9H7C9 122 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 C20orf141Q9NUB4 165 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 OR2M5A3KFT3 312 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 GOSR1O95249 250 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 FPR2P25090 351 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 OPRK1P41145 380 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 ST3GAL2Q16842 350 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 PRRX2Q99811 253 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 ADAT1Q9BUB4 502 aaKnown RBP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 SIRT3Q9NTG7 399 aaPredicted RBP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 TMEM30CPA0ZSE6 113 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 TOX3O15405 576 aaPredicted RBP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 GATCO43716 136 aaKnown RBP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 SSBP1Q04837 148 aaKnown RBP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 CTF1Q16619 201 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 KISS1RQ969F8 398 aaPredicted RBP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 ARHGAP5-AS1Q96IT6 56 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 CMTM3Q96MX0 182 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 MMP26Q9NRE1 261 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 SBK3P0C264 359 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 OR5AL1P0C617 328 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 TIAL1Q01085 375 aaKnown RBP eCLIP10.62□□□□□ -0.71
SCN8A-208ENST00000599343 TMPRSS11FQ6ZWK6 438 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 OR2W3Q7Z3T1 314 aa10.62□□□□□ -0.71
SCN8A-208ENST00000599343 F5H697 171 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 ABCD3P28288 659 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 IQCJQ1A5X6 159 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 CCDC190Q86UF4 302 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 OTOSQ8NHW6 89 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 MRGPRX1Q96LB2 322 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 GPR137Q96N19 417 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 FOXB1Q99853 325 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 WDR61Q9GZS3 305 aaKnown RBP10.61□□□□□ -0.71
SCN8A-208ENST00000599343 TRAPPC4Q9Y296 219 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 A0A0A6YYD5 115 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 FCGR3BO75015 233 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 GGNBP1Q5YKI7 109 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 C19orf35Q6ZS72 473 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 PRSS42Q7Z5A4 293 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 ABI3BPQ7Z7G0 1075 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 ANKRD53Q8N9V6 530 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 OR1F12Q8NHA8 337 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 KDM3BQ7LBC6 1761 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 FIGNL2A6NMB9 653 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 MBTPS2O43462 519 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 PLRG1O43660 514 aaKnown RBP10.61□□□□□ -0.71
SCN8A-208ENST00000599343 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
SCN8A-208ENST00000599343 GAMTQ14353 236 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 UQCC1Q9NVA1 299 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 FGF8P55075 233 aaPredicted RBP10.61□□□□□ -0.71
SCN8A-208ENST00000599343 FMODQ06828 376 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 FAM24BQ8N5W8 94 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 DOK5Q9P104 306 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 DOT1LQ8TEK3 1739 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 FUT3P21217 361 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 CHRNA7P36544 502 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 SLC38A11Q08AI6 406 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 VMA21Q3ZAQ7 101 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 DHRS11Q6UWP2 260 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 OR8D4Q8NGM9 314 aa10.61□□□□□ -0.71
SCN8A-208ENST00000599343 NDUFB3O43676 98 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 TTRP02766 147 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 NKG7Q16617 165 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 WDR38Q5JTN6 314 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 OR2A2Q6IF42 318 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 ASB13Q8WXK3 278 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 IFT22Q9H7X7 185 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 SLC6A13Q9NSD5 602 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 HDGFL3Q9Y3E1 203 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 NEURL1O76050 574 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 LPAR6P43657 344 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 CEBPEQ15744 281 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 LRRC10Q5BKY1 277 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 UQCC3Q6UW78 93 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 IL22RA2Q969J5 263 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 APOBEC3DQ96AK3 386 aaPredicted RBP10.6□□□□□ -0.71
SCN8A-208ENST00000599343 IGHV3-43A0A0B4J1X8 118 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 CBR3O75828 277 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 CEACAM5P06731 702 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 IGHV3-43DP0DP04 118 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 CCKARP32238 428 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 CCL7P80098 99 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 PPP1R1AQ13522 171 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 HLXQ14774 488 aaPredicted RBP10.6□□□□□ -0.71
SCN8A-208ENST00000599343 CLLU1Q5K131 121 aa10.6□□□□□ -0.71
SCN8A-208ENST00000599343 WIPI1Q5MNZ9 446 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms