RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 SPSB4Q96A44 273 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 PIMREGQ9BSJ6 248 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 ADAT1Q9BUB4 502 aaKnown RBP17.09■□□□□ 0.33
IRF3-221ENST00000598808 MYOZ1Q9NP98 299 aaPredicted RBP17.09■□□□□ 0.33
IRF3-221ENST00000598808 TREM2Q9NZC2 230 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 NUFIP1Q9UHK0 495 aaKnown RBP17.09■□□□□ 0.33
IRF3-221ENST00000598808 ZNF281Q9Y2X9 895 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 H0YL77 283 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 H3BSH0 61 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 SMAD7O15105 426 aaKnown RBP17.08■□□□□ 0.32
IRF3-221ENST00000598808 GNALP38405 381 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 DSCR9P59020 149 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 TNK1Q13470 666 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 ACSM3Q53FZ2 586 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 SPANXN2Q5MJ10 180 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 RDH5Q92781 318 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 KCTD12Q96CX2 325 aaKnown RBP17.08■□□□□ 0.32
IRF3-221ENST00000598808 SLC30A2Q9BRI3 323 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 PAPOLGQ9BWT3 736 aaKnown RBP17.08■□□□□ 0.32
IRF3-221ENST00000598808 BARHL1Q9BZE3 327 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 GPR84Q9NQS5 396 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 SLC22A13Q9Y226 551 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 ITPR3Q14573 2671 aa17.08■□□□□ 0.32
IRF3-221ENST00000598808 IGHV4-30-2A0A087WSY4 118 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 ANKRD61A6NGH8 418 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 ZNF879B4DU55 563 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 F5H5P2 479 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 P2RY10O00398 339 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 ZNF12P17014 697 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 MAPK3P27361 379 aaPredicted RBP17.07■□□□□ 0.32
IRF3-221ENST00000598808 CCR9P51686 369 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 HNRNPA0Q13151 305 aaKnown RBP17.07■□□□□ 0.32
IRF3-221ENST00000598808 ALKBH1Q13686 389 aaKnown RBP17.07■□□□□ 0.32
IRF3-221ENST00000598808 MZT2AQ6P582 158 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 UNQ9370/PRO34162Q6UXP9 181 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 CEACAM19Q7Z692 300 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 FTMTQ8N4E7 242 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 ITLN1Q8WWA0 313 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 LYZL4Q96KX0 146 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 CEP19Q96LK0 163 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 OR2V2Q96R30 315 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 NKIRAS2Q9NYR9 191 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 ZNF391Q9UJN7 358 aa17.07■□□□□ 0.32
IRF3-221ENST00000598808 IGHV1-69-2A0A0G2JMI3 117 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 A0A0U1RQV5 110 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 TMEM212A6NML5 194 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 RNF223E7ERA6 249 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 H7C1Q1 480 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 MLNRO43193 412 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 SRSF10O75494 262 aaKnown RBP17.06■□□□□ 0.32
IRF3-221ENST00000598808 TTRP02766 147 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 DDOSTP39656 456 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 DDI2Q5TDH0 399 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 CCDC190Q86UF4 302 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 OR8S1Q8NH09 359 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 SOX7Q9BT81 388 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 COMMD4Q9H0A8 199 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 G6PC2Q9NQR9 355 aa17.06■□□□□ 0.32
IRF3-221ENST00000598808 MRPL15Q9P015 296 aaKnown RBP17.06■□□□□ 0.32
IRF3-221ENST00000598808 NOP16Q9Y3C1 178 aaKnown RBP17.06■□□□□ 0.32
IRF3-221ENST00000598808 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.05■□□□□ 0.32
IRF3-221ENST00000598808 LOC390937A0A1W2PQ73 354 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 UCHL1P09936 223 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 TNFRSF1AP19438 455 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 COL8A2P25067 703 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 SRP9P49458 86 aaKnown RBP17.05■□□□□ 0.32
IRF3-221ENST00000598808 MXD1Q05195 221 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 HFEQ30201 348 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 WDR38Q5JTN6 314 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 CATSPERDQ86XM0 798 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 CSNK2A3Q8NEV1 391 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 C10orf105Q8TEF2 133 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 SLC22A4Q9H015 551 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 A0A1B0GVI7 797 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 PPIHO43447 177 aaKnown RBP17.05■□□□□ 0.32
IRF3-221ENST00000598808 ADH4P08319 380 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 CALRP27797 417 aaKnown RBP17.05■□□□□ 0.32
IRF3-221ENST00000598808 MAP2K3P46734 347 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 PPP3R1P63098 170 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 SPRNQ5BIV9 151 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 ELMOD2Q8IZ81 293 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 MAPK1IP1LQ8NDC0 245 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 SEMA6DQ8NFY4 1073 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 OR5AK2Q8NH90 309 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 CCL17Q92583 94 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 YIPF5Q969M3 257 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 PLEKHA1Q9HB21 404 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 ADAM30Q9UKF2 790 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 CACNG2Q9Y698 323 aa17.05■□□□□ 0.32
IRF3-221ENST00000598808 MED13LQ71F56 2210 aa17.04■□□□□ 0.32
IRF3-221ENST00000598808 MTRF1O75570 445 aaKnown RBP17.04■□□□□ 0.32
IRF3-221ENST00000598808 CD55P08174 381 aa17.04■□□□□ 0.32
IRF3-221ENST00000598808 ACHEP22303 614 aa17.04■□□□□ 0.32
IRF3-221ENST00000598808 ACKR3P25106 362 aa17.04■□□□□ 0.32
IRF3-221ENST00000598808 RPS11P62280 158 aaKnown RBP eCLIP17.04■□□□□ 0.32
IRF3-221ENST00000598808 OR8B8Q15620 311 aa17.04■□□□□ 0.32
IRF3-221ENST00000598808 PRSS35Q8N3Z0 413 aa17.04■□□□□ 0.32
IRF3-221ENST00000598808 OR2G2Q8NGZ5 317 aa17.04■□□□□ 0.32
IRF3-221ENST00000598808 PIGCQ92535 297 aa17.04■□□□□ 0.32
IRF3-221ENST00000598808 RNF166Q96A37 237 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms