RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 GNG3P63215 75 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 MRPL28Q13084 256 aaKnown RBP14.72□□□□□ -0.05
USHBP1-209ENST00000598570 TP53I3Q53FA7 332 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 SETD9Q8NE22 299 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 RPS4Y2Q8TD47 263 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 HAVCR2Q8TDQ0 301 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 C12orf43Q96C57 262 aaKnown RBP14.72□□□□□ -0.05
USHBP1-209ENST00000598570 RNF170Q96K19 258 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 FAM71F1Q96KD3 344 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-209ENST00000598570 ADI1Q9BV57 179 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 BEX2Q9BXY8 128 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 TMPRSS13Q9BYE2 586 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 SHARPINQ9H0F6 387 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 AMBNQ9NP70 447 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 OPN4Q9UHM6 478 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 PIGLQ9Y2B2 252 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 COL6A5A8TX70 2615 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 PQLC2LA1A4F0 135 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 ISPDA4D126 451 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 OOEPA6NGQ2 149 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 P2RY10O00398 339 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 NOS1APO75052 506 aaPredicted RBP14.71□□□□□ -0.05
USHBP1-209ENST00000598570 RPP14O95059 124 aaKnown RBP14.71□□□□□ -0.05
USHBP1-209ENST00000598570 CLIC3O95833 236 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 NRASP01111 189 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 AVPP01185 164 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 GNAO1P09471 354 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 UBCP0CG48 685 aaKnown RBP14.71□□□□□ -0.05
USHBP1-209ENST00000598570 FAHP16930 419 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 DCKP27707 260 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 SEC61A1P61619 476 aaKnown RBP14.71□□□□□ -0.05
USHBP1-209ENST00000598570 CSNK2BP67870 215 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 KCNJ8Q15842 424 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 CLVS2Q5SYC1 327 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 FAM90A1Q86YD7 464 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 SCCPDHQ8NBX0 429 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 ZNF485Q8NCK3 441 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 NEIL1Q96FI4 390 aaPredicted RBP14.71□□□□□ -0.05
USHBP1-209ENST00000598570 GNG8Q9UK08 70 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 PCDHB10Q9UN67 800 aa14.71□□□□□ -0.05
USHBP1-209ENST00000598570 CUBNO60494 3623 aa14.71□□□□□ -0.06
USHBP1-209ENST00000598570 TRAV38-1A0A0B4J264 116 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 CDIPTO14735 213 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 FCN3O75636 299 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF205O95201 554 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 RPSAP08865 295 aaKnown RBP14.7□□□□□ -0.06
USHBP1-209ENST00000598570 PPIAL4GP0DN37 164 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF12P17014 697 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 EGR1P18146 543 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 MPZP25189 248 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 TGM4P49221 684 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 HOXA4Q00056 320 aaPredicted RBP14.7□□□□□ -0.06
USHBP1-209ENST00000598570 PAX8Q06710 450 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 RIPK1Q13546 671 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 TMEM244Q5VVB8 128 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 LYPD2Q6UXB3 125 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 LHFPL3Q86UP9 236 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 CNIH3Q8TBE1 160 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 MRPL48Q96GC5 212 aaKnown RBP14.7□□□□□ -0.06
USHBP1-209ENST00000598570 ALG8Q9BVK2 526 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 DNTTIP1Q9H147 329 aa14.7□□□□□ -0.06
USHBP1-209ENST00000598570 METTL17Q9H7H0 456 aaPredicted RBP14.7□□□□□ -0.06
USHBP1-209ENST00000598570 ISG20L2Q9H9L3 353 aaKnown RBP14.7□□□□□ -0.06
USHBP1-209ENST00000598570 DIMT1Q9UNQ2 313 aaKnown RBP14.7□□□□□ -0.06
USHBP1-209ENST00000598570 A0A0G2JMP0 313 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 A0A0X1KG70 313 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 IRGMA1A4Y4 181 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 PIPP12273 146 aaPredicted RBP14.69□□□□□ -0.06
USHBP1-209ENST00000598570 AMY2BP19961 511 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 NPY4RP50391 375 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 FAM220AQ7Z4H9 259 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 THAP5Q7Z6K1 395 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 DEFB108BQ8NET1 73 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 OR4M2Q8NGB6 313 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 CYGBQ8WWM9 190 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 AQP3Q92482 292 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 C4orf36Q96KX1 117 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 DMRTB1Q96MA1 342 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 TECTBQ96PL2 329 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 HIST1H2AAQ96QV6 131 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 MMP26Q9NRE1 261 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 FKBP14Q9NWM8 211 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 UBAP1Q9NZ09 502 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 CTSZQ9UBR2 303 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 INSIG2Q9Y5U4 225 aa14.69□□□□□ -0.06
USHBP1-209ENST00000598570 KIR2DS1A0A191URI9 304 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF732B4DXR9 585 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 J3QLW9 94 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 SYT7O43581 403 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 ALX3O95076 343 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 ZNF19P17023 458 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 HNF1AP20823 631 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 GPM6AP51674 278 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 LCN2P80188 198 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 ALKBH1Q13686 389 aaKnown RBP14.68□□□□□ -0.06
USHBP1-209ENST00000598570 UBE2V2Q15819 145 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 CCDC58Q4VC31 144 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 ESCO2Q56NI9 601 aa14.68□□□□□ -0.06
USHBP1-209ENST00000598570 WDR25Q64LD2 544 aaPredicted RBP14.68□□□□□ -0.06
USHBP1-209ENST00000598570 UTS2BQ765I0 119 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms