RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CXCR4P61073 352 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 ACTR3P61158 418 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 RIPPLY1Q0D2K3 151 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 FOXL1Q12952 345 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 CEACAM21Q3KPI0 293 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 DUX4L9Q6RFH8 374 aaPredicted RBP12.46□□□□□ -0.41
LIG1-215ENST00000597901 MOB3CQ70IA8 216 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 SLC36A1Q7Z2H8 476 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 THAP5Q7Z6K1 395 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 SLC35F2Q8IXU6 374 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 OR5A2Q8NGI9 324 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 SGMS2Q8NHU3 365 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 ST8SIA4Q92187 359 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 SLC25A28Q96A46 364 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 CENPNQ96H22 339 aaPredicted RBP12.46□□□□□ -0.41
LIG1-215ENST00000597901 FAM71F1Q96KD3 344 aaPredicted RBP12.46□□□□□ -0.41
LIG1-215ENST00000597901 RAB3IPQ96QF0 476 aaPredicted RBP12.46□□□□□ -0.41
LIG1-215ENST00000597901 CIB1Q99828 191 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 SIRPDQ9H106 197 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 OR51I2Q9H344 312 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 ADGRL4Q9HBW9 690 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 SNTG1Q9NSN8 517 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 DUX4Q9UBX2 424 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 NUFIP1Q9UHK0 495 aaKnown RBP12.46□□□□□ -0.41
LIG1-215ENST00000597901 ENOPH1Q9UHY7 261 aa12.46□□□□□ -0.41
LIG1-215ENST00000597901 RPUSD1Q9UJJ7 312 aaKnown RBP12.46□□□□□ -0.41
LIG1-215ENST00000597901 MDFIC2A0A1B0GVS7 189 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 ZNF670-ZNF695F2Z2N8 137 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 GPR37O15354 613 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 SRSF10O75494 262 aaKnown RBP12.45□□□□□ -0.42
LIG1-215ENST00000597901 CIB2O75838 187 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 TTRP02766 147 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 GPM6AP51674 278 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 MFGE8Q08431 387 aaPredicted RBP12.45□□□□□ -0.42
LIG1-215ENST00000597901 PDCD1Q15116 288 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 ZNF829Q3KNS6 432 aaPredicted RBP12.45□□□□□ -0.42
LIG1-215ENST00000597901 DMRTC1Q5HYR2 192 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 CEP78Q5JTW2 689 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 METTL11BQ5VVY1 283 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 STUMQ69YW2 141 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 COMMD2Q86X83 199 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 FAM216BQ8N7L0 139 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 LY6G5BQ8NDX9 201 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 CLN6Q9NWW5 311 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 DNAJB11Q9UBS4 358 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 PIGLQ9Y2B2 252 aa12.45□□□□□ -0.42
LIG1-215ENST00000597901 HOXA3O43365 443 aaPredicted RBP12.44□□□□□ -0.42
LIG1-215ENST00000597901 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
LIG1-215ENST00000597901 RHBDL1O75783 438 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 GNG3P63215 75 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 EGR3Q06889 387 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 IKZF1Q13422 519 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 ZBTB37Q5TC79 503 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 RUSC1-AS1Q66K80 236 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 C16orf87Q6PH81 154 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 Q6YL49 198 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 ZNF788Q6ZQV5 615 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 GID4Q8IVV7 300 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 ELMOD2Q8IZ81 293 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 ANGPTL6Q8NI99 470 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 ZNF671Q8TAW3 534 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 LHX4Q969G2 390 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 MED30Q96HR3 178 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 DMRTB1Q96MA1 342 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 OSBPL10Q9BXB5 764 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 DNTTIP1Q9H147 329 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 NOX4Q9NPH5 578 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 WARS2Q9UGM6 360 aaKnown RBP12.44□□□□□ -0.42
LIG1-215ENST00000597901 MRM2Q9UI43 246 aaKnown RBP12.44□□□□□ -0.42
LIG1-215ENST00000597901 ENPP5Q9UJA9 477 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 OR52A1Q9UKL2 312 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 OAZ3Q9UMX2 235 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 R4GMQ9 66 aa12.44□□□□□ -0.42
LIG1-215ENST00000597901 IGHV1-69DA0A0B4J2H0 117 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 A0A1B0GTI1 187 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 LOC110117498-PIK3R3F6TDL0 507 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 NRASP01111 189 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 IGHV1-69P01742 117 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 TFF1P04155 84 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 ACAA1P09110 424 aaPredicted RBP12.43□□□□□ -0.42
LIG1-215ENST00000597901 FAHP16930 419 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 GLRA1P23415 457 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 CDONQ4KMG0 1287 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 LRRC10Q5BKY1 277 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 PLEKHG7Q6ZR37 379 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 ASRGL1Q7L266 308 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 OR51G2Q8NGK0 314 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 GATAD2BQ8WXI9 593 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 ZNF747Q9BV97 191 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 RIBC2Q9H4K1 309 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 NLKQ9UBE8 527 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 GTF2A1LQ9UNN4 478 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 SNX5Q9Y5X3 404 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 KPTNQ9Y664 436 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 ANK2Q01484 3957 aa12.43□□□□□ -0.42
LIG1-215ENST00000597901 SAC3D1A6NKF1 404 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 OR5B21A6NL26 309 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 OR2AT4A6NND4 320 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 SPRY1O43609 319 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms