RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PPIAL4EA0A075B759 164 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 TRBV2A0A0J9YWF9 115 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 OR5B21A6NL26 309 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 TMEM212A6NML5 194 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF732B4DXR9 585 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 PPIAL4DF5H284 164 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 CD5LO43866 347 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 LMX1BO60663 402 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF205O95201 554 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 PPIAL4FP0DN26 164 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 C21orf33P30042 268 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 THBS2P35442 1172 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 MDH2P40926 338 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 GPM6AP51674 278 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 GTF2A1P52655 376 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 GNG3P63215 75 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 KRTAP1-1Q07627 177 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 ZMYND11Q15326 602 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 DMRTC1Q5HYR2 192 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 FAM201AQ5SY85 155 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 MUC20Q8N307 709 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 SPICQ8N5J4 248 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 OR5A2Q8NGI9 324 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 OR5AK2Q8NH90 309 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 GATAD2BQ8WXI9 593 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 FGF23Q9GZV9 251 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 Q9H521 79 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 PCDHB10Q9UN67 800 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 PPIAL4AQ9Y536 164 aa16.53■□□□□ 0.24
SHKBP1-214ENST00000597396 ANKRD61A6NGH8 418 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 CDK1P06493 297 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 RPSAP08865 295 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF16P17020 682 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF20P17024 532 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 LMO4P61968 165 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 CCDC58Q4VC31 144 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 TMEM155Q4W5P6 130 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 TMEM42Q69YG0 159 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 RPL22L1Q6P5R6 122 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 LRRC28Q86X40 367 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 OR13C3Q8NGS6 347 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 RPL3LQ92901 407 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 C10orf35Q96D05 121 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 PDCD1LG2Q9BQ51 273 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF665Q9H7R5 613 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 TRIM36Q9NQ86 728 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 BABAM2Q9NXR7 383 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 ERGIC3Q9Y282 383 aa16.52■□□□□ 0.24
SHKBP1-214ENST00000597396 CDIPTO14735 213 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 GATBO75879 557 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 ZFPL1O95159 310 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 SERPINA3P01011 423 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 IGHV2-5P01817 119 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 CD80P33681 288 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 CDK5R1Q15078 307 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 XAF1Q6GPH4 301 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 C11orf53Q8IXP5 236 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 SCCPDHQ8NBX0 429 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 OR10AC1Q8NH08 325 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 LRRC29Q8WV35 223 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 MSI2Q96DH6 328 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 YAE1D1Q9NRH1 226 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 ERVK-18Q9QC07 812 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 SLC7A11Q9UPY5 501 aa16.51■□□□□ 0.23
SHKBP1-214ENST00000597396 WNT4P56705 351 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 WDR82Q6UXN9 313 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 LINC01356Q8N9X3 169 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 C19orf18Q8NEA5 215 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 DEFB108BQ8NET1 73 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 OR51A4Q8NGJ6 313 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 TRMT10AQ8TBZ6 339 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 TSEN15Q8WW01 171 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 PP6455Q8WZ26 134 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 FGGYQ96C11 551 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 CHST5Q9GZS9 411 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 TLNRD1Q9H1K6 362 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 METTL17Q9H7H0 456 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 TMEM165Q9HC07 324 aa16.5■□□□□ 0.23
SHKBP1-214ENST00000597396 HIVEP2P31629 2446 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 ARHGAP32A7KAX9 2087 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 FAM157AC9JC47 383 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 LGALS8O00214 317 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 LALBAP00709 142 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 TGFAP01135 160 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 TAS2R43P59537 309 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 SLC35A2P78381 396 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 CNN3Q15417 329 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 FAM76BQ5HYJ3 339 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 RBM48Q5RL73 367 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 SFRP4Q6FHJ7 346 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 GCSAMQ8N6F7 178 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 NANOGP1Q8N7R0 232 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 OR10Z1Q8NGY1 313 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 NPRL2Q8WTW4 380 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 ADAT3Q96EY9 351 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 TECTBQ96PL2 329 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 OR51I2Q9H344 312 aa16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 PATZ1Q9HBE1 687 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 PAK1IP1Q9NWT1 392 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-214ENST00000597396 BLOC1S6Q9UL45 172 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms