RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 LYPD4Q6UWN0 246 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 HS3ST5Q8IZT8 346 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 PAPD5Q8NDF8 572 aaKnown RBP12.61□□□□□ -0.39
LIG1-214ENST00000597146 WFDC9Q8NEX5 89 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 NPRL2Q8WTW4 380 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 THEM6Q8WUY1 208 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 C17orf50Q8WW18 174 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 NRBF2Q96F24 287 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 RANBP3Q9H6Z4 567 aaPredicted RBP12.61□□□□□ -0.39
LIG1-214ENST00000597146 FN3KRPQ9HA64 309 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 PAPOLBQ9NRJ5 636 aaKnown RBP12.61□□□□□ -0.39
LIG1-214ENST00000597146 H2AFY2Q9P0M6 372 aaPredicted RBP12.61□□□□□ -0.39
LIG1-214ENST00000597146 DUX4Q9UBX2 424 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 MAB21L2Q9Y586 359 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 COMMD3-BMI1R4GMX3 469 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 U3KQK5 164 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 A0A1W2PRX2 142 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 ZNF878C9JN71 531 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 G3V2T6 193 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 CHST1O43916 411 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 ANXA2P07355 339 aaKnown RBP12.6□□□□□ -0.39
LIG1-214ENST00000597146 H2BFMP0C1H6 154 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 FASP25445 335 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 HOXD3P31249 432 aaPredicted RBP12.6□□□□□ -0.39
LIG1-214ENST00000597146 GRB2P62993 217 aaKnown RBP12.6□□□□□ -0.39
LIG1-214ENST00000597146 GUCA2AQ02747 115 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 POU4F2Q12837 409 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 GK2Q14410 553 aaPredicted RBP12.6□□□□□ -0.39
LIG1-214ENST00000597146 OR8G1Q15617 311 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 KCNJ8Q15842 424 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 CRIP3Q6Q6R5 217 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 COLCA1Q6ZS62 124 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 DPY19L4Q7Z388 723 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 CPOQ8IVL8 374 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 OR5K1Q8NHB7 308 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 DNAJC9Q8WXX5 260 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 RORBQ92753 470 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 NMNAT2Q9BZQ4 307 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 SERTAD4Q9NUC0 356 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 TVP23BQ9NYZ1 205 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 AP4S1Q9Y587 144 aa12.6□□□□□ -0.39
LIG1-214ENST00000597146 A0A1B0GWJ7 208 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 PAX6P26367 422 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 CD200P41217 278 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 ELF3P78545 371 aaPredicted RBP12.59□□□□□ -0.39
LIG1-214ENST00000597146 MZT1Q08AG7 82 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 TIGD6Q17RP2 521 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 TMEM236Q5W0B7 351 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 CCDC121Q6ZUS5 278 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 FAM90A1Q86YD7 464 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 Q8N7P7 452 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 BEND2Q8NDZ0 799 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 NKX3-1Q99801 234 aaPredicted RBP12.59□□□□□ -0.39
LIG1-214ENST00000597146 SSX3Q99909 188 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 PRRG3Q9BZD7 231 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 SLC22A4Q9H015 551 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 BRD7Q9NPI1 651 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 PNRC2Q9NPJ4 139 aaKnown RBP12.59□□□□□ -0.39
LIG1-214ENST00000597146 RNF7Q9UBF6 113 aa12.59□□□□□ -0.39
LIG1-214ENST00000597146 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.58□□□□□ -0.4
LIG1-214ENST00000597146 OOEPA6NGQ2 149 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 CD300LBA8K4G0 201 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 E9PQ18 207 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 ECDO95905 644 aaPredicted RBP12.58□□□□□ -0.4
LIG1-214ENST00000597146 SLC2A1P11166 492 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 FCGR1AP12314 374 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 CA6P23280 308 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 CX3CR1P49238 355 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 CRISP1P54107 249 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 CDK5Q00535 292 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 KRTAP27-1Q3LI81 207 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 ZDHHC13Q8IUH4 622 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 CELF2-AS1Q8N7Q2 184 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 WIPF2Q8TF74 440 aaPredicted RBP12.58□□□□□ -0.4
LIG1-214ENST00000597146 ERGIC1Q969X5 290 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 PGAM5Q96HS1 289 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 ABHD6Q9BV23 337 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 NPFFR1Q9GZQ6 430 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 ZNF702PQ9H963 129 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 KRT84Q9NSB2 600 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.4
LIG1-214ENST00000597146 HYDINQ4G0P3 5121 aa12.58□□□□□ -0.4
LIG1-214ENST00000597146 IGHV3OR15-7A0A075B7D8 119 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 TRAV38-1A0A0B4J264 116 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 ANKRD30BLA7E2S9 258 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 XRCC2O43543 280 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 SLC35A2P78381 396 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 ZNF92Q03936 586 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 DOC2BQ14184 412 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 GFOD2Q3B7J2 385 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 SNAI3Q3KNW1 292 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 GLYATL3Q5SZD4 288 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 FAM57BQ71RH2 274 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 AMIGO2Q86SJ2 522 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 LY6G5BQ8NDX9 201 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 OR2AE1Q8NHA4 323 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 TNFRSF14Q92956 283 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 OR10A2Q9H208 303 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms