RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 CST4P01036 141 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 APOC1P02654 83 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 ACAA1P09110 424 aaPredicted RBP13.13□□□□□ -0.31
LIM2-202ENST00000596399 POU1F1P28069 291 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 GABRA2P47869 451 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 UBE2E1P51965 193 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 GUCA2AQ02747 115 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 SPATS1Q496A3 300 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 FAM76BQ5HYJ3 339 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 CEP78Q5JTW2 689 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 SHFQ7M4L6 423 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 PIGWQ7Z7B1 504 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 DHFR2Q86XF0 187 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.13□□□□□ -0.31
LIM2-202ENST00000596399 ZNRF1Q8ND25 227 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 OR8B12Q8NGG6 310 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 OR10Z1Q8NGY1 313 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 OTOSQ8NHW6 89 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 MAGIXQ9H6Y5 334 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 NLKQ9UBE8 527 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 ANKRD61A6NGH8 418 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 OR2AT4A6NND4 320 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 H3BUX3 64 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 PSMD9O00233 223 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 SIGLEC5O15389 551 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 PSG2P11465 335 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 TGFBR2P37173 567 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 GNGT1P63211 74 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 GINS1Q14691 196 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 LY6EQ16553 131 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 LCN8Q6JVE9 175 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 CD300LDQ6UXZ3 194 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 C1orf122Q6ZSJ8 110 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 ZDHHC23Q8IYP9 409 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 C11orf44Q8N8P7 122 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 GIPC3Q8TF64 312 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 MED30Q96HR3 178 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 RGCCQ9H4X1 137 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 NDE1Q9NXR1 346 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 FOXJ3Q9UPW0 622 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 MAB21L2Q9Y586 359 aa13.12□□□□□ -0.31
LIM2-202ENST00000596399 TMEM210A6NLX4 147 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 ZNF732B4DXR9 585 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
LIM2-202ENST00000596399 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
LIM2-202ENST00000596399 GLRA1P23415 457 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 ERVFRD-1P60508 538 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 TRIM25Q14258 630 aaKnown RBP13.11□□□□□ -0.31
LIM2-202ENST00000596399 FAM98BQ52LJ0 330 aaKnown RBP13.11□□□□□ -0.31
LIM2-202ENST00000596399 CPOQ8IVL8 374 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 HS3ST5Q8IZT8 346 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 FTMTQ8N4E7 242 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 TMEM185AQ8NFB2 350 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 PPP1R14AQ96A00 147 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 CLPTM1LQ96KA5 538 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 DMRTB1Q96MA1 342 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 ZNF488Q96MN9 340 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 DNTTIP1Q9H147 329 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 METTL8Q9H825 291 aaKnown RBP13.11□□□□□ -0.31
LIM2-202ENST00000596399 YY1AP1Q9H869 796 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 C19orf12Q9NSK7 152 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 ZNF222Q9UK12 451 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 LRP12Q9Y561 859 aa13.11□□□□□ -0.31
LIM2-202ENST00000596399 MEGF11A6BM72 1044 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 PRR32B1ATL7 298 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 G3V4G9 280 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 M0R1W7 72 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 ANGPTL7O43827 346 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 DCTN3O75935 186 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 PRB2P02812 416 aaPredicted RBP13.1□□□□□ -0.31
LIM2-202ENST00000596399 CSF1P09603 554 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 GABRA5P31644 462 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 CAV3P56539 151 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 PSMA6P60900 246 aaKnown RBP13.1□□□□□ -0.31
LIM2-202ENST00000596399 C2orf68Q2NKX9 166 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 TMEM236Q5W0B7 351 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 FAM185AQ8N0U4 392 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 BATF2Q8N1L9 274 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 BEND2Q8NDZ0 799 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 OR5R1Q8NH85 324 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 SSX3Q99909 188 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 CHID1Q9BWS9 393 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 TTTY10Q9BZA0 68 aa13.1□□□□□ -0.31
LIM2-202ENST00000596399 H0YAE9 185 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 CST1P01037 141 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
LIM2-202ENST00000596399 PRKACGP22612 351 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
LIM2-202ENST00000596399 SNCBQ16143 134 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 NCR3LG1Q68D85 454 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 TET2Q6N021 2002 aaPredicted RBP13.09□□□□□ -0.31
LIM2-202ENST00000596399 MKXQ8IYA7 352 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 ZNF454Q8N9F8 522 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 FAM81AQ8TBF8 368 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 CCDC124Q96CT7 223 aaKnown RBP13.09□□□□□ -0.31
LIM2-202ENST00000596399 HIST1H2AAQ96QV6 131 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 FBLN5Q9UBX5 448 aa13.09□□□□□ -0.31
LIM2-202ENST00000596399 MRPL3P09001 348 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms