RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	DNAJC9	Q8WXX5	260 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SPTSSA	Q969W0	71 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OTULIN	Q96BN8	352 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	DUS3L	Q96G46	650 aa	Known RBP	11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	INTS14	Q96SY0	518 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	NKX3-1	Q99801	234 aa	Predicted RBP	11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	COPS4	Q9BT78	406 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SLC25A19	Q9HC21	320 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SERTAD4	Q9NUC0	356 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	MAB21L2	Q9Y586	359 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	DNAH7	Q8WXX0	4024 aa		11.19	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OOEP	A6NGQ2	149 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	PRR23D1	E9PI22	279 aa	Predicted RBP	11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	ECD	O95905	644 aa	Predicted RBP	11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	DAP	P51397	102 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	MALL	Q13021	153 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	EIF2B1	Q14232	305 aa	Known RBP	11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	TMEM236	Q5W0B7	351 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	PLBD1	Q6P4A8	553 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CRIP3	Q6Q6R5	217 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	METAP1D	Q6UB28	335 aa	Predicted RBP	11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	DRAM2	Q6UX65	266 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	ZNF826P	Q6ZT77	177 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	ASRGL1	Q7L266	308 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	DPY19L4	Q7Z388	723 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	FAM90A1	Q86YD7	464 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	TIGD4	Q8IY51	512 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	LY6G5B	Q8NDX9	201 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	ERGIC1	Q969X5	290 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OR5M11	Q96RB7	305 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	KCNJ15	Q99712	375 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OR51V1	Q9H2C8	321 aa		11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.18	□□□□□ -0.62
SHKBP1-208	ENST00000595726	TRAV38-1	A0A0B4J264	116 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	PRODH	O43272	600 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CHST1	O43916	411 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	HMGN1	P05114	100 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	FAS	P25445	335 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	GSTT1	P30711	240 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CD200	P41217	278 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	PRKX	P51817	358 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CRISP1	P54107	249 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	PGAP1	Q75T13	922 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CELF2-AS1	Q8N7Q2	184 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	BEND2	Q8NDZ0	799 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	BBS1	Q8NFJ9	593 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OR2AE1	Q8NHA4	323 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	TNFRSF14	Q92956	283 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CCL13	Q99616	98 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	ABHD6	Q9BV23	337 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	FN3KRP	Q9HA64	309 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CENPM	Q9NSP4	180 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	AP4S1	Q9Y587	144 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726		U3KQK5	164 aa		11.17	□□□□□ -0.62
SHKBP1-208	ENST00000595726	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	C3orf84	H3BNL1	204 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	NDUFA2	O43678	99 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SELENOF	O60613	162 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SLC2A1	P11166	492 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SLC2A5	P22732	501 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CA6	P23280	308 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	GRB2	P62993	217 aa	Known RBP	11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	GUCA2A	Q02747	115 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	ZNF92	Q03936	586 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	TAF13	Q15543	124 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	KLHL12	Q53G59	568 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SLC35D3	Q5M8T2	416 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	GLYATL3	Q5SZD4	288 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SHF	Q7M4L6	423 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	MRPL21	Q7Z2W9	205 aa	Known RBP	11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CPO	Q8IVL8	374 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	RNF133	Q8WVZ7	376 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	AJUBA	Q96IF1	538 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	AMELY	Q99218	206 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	GABARAPL1	Q9H0R8	117 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	ZNF702P	Q9H963	129 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	C1orf123	Q9NWV4	160 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726	LYST	Q99698	3801 aa		11.16	□□□□□ -0.62
SHKBP1-208	ENST00000595726		G3V2T6	193 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	MITF	O75030	526 aa	Predicted RBP	11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CIB2	O75838	187 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	GRP	P07492	148 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	FCGR1A	P12314	374 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	HSD11B1	P28845	292 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OPRL1	P41146	370 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SLC15A1	P46059	708 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	CX3CR1	P49238	355 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	ESRRG	P62508	458 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	PTGES3	Q15185	160 aa	Known RBP	11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OR8G1	Q15617	311 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	SNAPC1	Q16533	368 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	KDM4D	Q6B0I6	523 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	AMIGO2	Q86SJ2	522 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	GCSAM	Q8N6F7	178 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OR51G2	Q8NGK0	314 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	OTOS	Q8NHW6	89 aa		11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	WIPF2	Q8TF74	440 aa	Predicted RBP	11.15	□□□□□ -0.62
SHKBP1-208	ENST00000595726	TEX12	Q9BXU0	123 aa		11.15	□□□□□ -0.62

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