RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ESRRGP62508 458 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 CSNK2BP67870 215 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 ELF3P78545 371 aaPredicted RBP12.11□□□□□ -0.47
PNKP-202ENST00000593706 FAM3AP98173 230 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
PNKP-202ENST00000593706 EGR3Q06889 387 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 GFOD2Q3B7J2 385 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 C12orf73Q69YU5 71 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 METAP1DQ6UB28 335 aaPredicted RBP12.11□□□□□ -0.47
PNKP-202ENST00000593706 SLC16A9Q7RTY1 509 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 WDR86Q86TI4 376 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 NPRL2Q8WTW4 380 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 SGK3Q96BR1 496 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 C16orf95Q9H693 158 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 RNPEPL1Q9HAU8 725 aa12.11□□□□□ -0.47
PNKP-202ENST00000593706 NKX6-3A6NJ46 265 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 G3V2T6 193 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 M0R129 80 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 NPFFO15130 113 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 LYNP07948 512 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 CSF1P09603 554 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 FASP25445 335 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 TGFBR2P37173 567 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 GNALP38405 381 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 GMFBP60983 142 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 KLRD1Q13241 179 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 APOFQ13790 326 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 SNAPC1Q16533 368 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 LRRC10Q5BKY1 277 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 SLX4IPQ5VYV7 408 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 WDR82Q6UXN9 313 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 OR52H1Q8NGJ2 320 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 REEP6Q96HR9 211 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
PNKP-202ENST00000593706 KRT84Q9NSB2 600 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 TVP23BQ9NYZ1 205 aa12.1□□□□□ -0.47
PNKP-202ENST00000593706 ZNF816-ZNF321PA0A0X1KG74 233 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 MEIOCA2RUB1 952 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 RNASEK-C17orf49H0YIS7 233 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 GPR37O15354 613 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 APOC1P02654 83 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 FCGR1AP12314 374 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 SAA4P35542 130 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 DLX1P56177 255 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 PSMA6P60900 246 aaKnown RBP12.09□□□□□ -0.47
PNKP-202ENST00000593706 ROM1Q03395 351 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 AADACL4Q5VUY2 407 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 FAM57BQ71RH2 274 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 AMIGO2Q86SJ2 522 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 ZDHHC13Q8IUH4 622 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 GALNT4Q8N4A0 578 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 LY6G5BQ8NDX9 201 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 OR1M1Q8NGA1 313 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 OR5R1Q8NH85 324 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 C12orf43Q96C57 262 aaKnown RBP12.09□□□□□ -0.47
PNKP-202ENST00000593706 SEH1LQ96EE3 360 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 TEAD3Q99594 435 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 CIB1Q99828 191 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 YIPF3Q9GZM5 350 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 PPA2Q9H2U2 334 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 SP140LQ9H930 580 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 DNAJC27Q9NZQ0 273 aa12.09□□□□□ -0.47
PNKP-202ENST00000593706 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 DSCAML1Q8TD84 2053 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 A0A1W2PQ09 198 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 ANXA2P2A6NMY6 339 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 H3BNX3 289 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.08□□□□□ -0.48
PNKP-202ENST00000593706 TSPAN9O75954 239 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 H2BFMP0C1H6 154 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 ACKR3P25106 362 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 GABRA5P31644 462 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 GSK3AP49840 483 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 HCCSP53701 268 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 ACTR3P61158 418 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 Q6ZTK2 550 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 BCDIN3DQ7Z5W3 292 aaKnown RBP12.08□□□□□ -0.48
PNKP-202ENST00000593706 C11orf53Q8IXP5 236 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 FTMTQ8N4E7 242 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 CENPNQ96H22 339 aaPredicted RBP12.08□□□□□ -0.48
PNKP-202ENST00000593706 LYZL4Q96KX0 146 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 DMRTB1Q96MA1 342 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 MICU1Q9BPX6 476 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 DCTN5Q9BTE1 182 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 RTL8AQ9BWD3 113 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 TEX12Q9BXU0 123 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 GABARAPL3Q9BY60 117 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 RGCCQ9H4X1 137 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 PPP1R3EQ9H7J1 279 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 FAM206AQ9NX38 181 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 OAZ3Q9UMX2 235 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 COPS3Q9UNS2 423 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 LRP12Q9Y561 859 aa12.08□□□□□ -0.48
PNKP-202ENST00000593706 CDIPTO14735 213 aa12.07□□□□□ -0.48
PNKP-202ENST00000593706 SELLP14151 372 aa12.07□□□□□ -0.48
PNKP-202ENST00000593706 CFL1P23528 166 aaKnown RBP12.07□□□□□ -0.48
PNKP-202ENST00000593706 RPS7P62081 194 aaKnown RBP12.07□□□□□ -0.48
PNKP-202ENST00000593706 IL5RAQ01344 420 aa12.07□□□□□ -0.48
PNKP-202ENST00000593706 SNCBQ16143 134 aa12.07□□□□□ -0.48
PNKP-202ENST00000593706 STUMQ69YW2 141 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms