RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 FAM98BQ52LJ0 330 aaKnown RBP18.54■□□□□ 0.56
SSBP4-203ENST00000593641 PNKDQ8N490 385 aa18.54■□□□□ 0.56
SSBP4-203ENST00000593641 IQCF1Q8N6M8 205 aa18.54■□□□□ 0.56
SSBP4-203ENST00000593641 ANGPTL6Q8NI99 470 aa18.54■□□□□ 0.56
SSBP4-203ENST00000593641 HIST1H2AAQ96QV6 131 aa18.54■□□□□ 0.56
SSBP4-203ENST00000593641 NIPSNAP1Q9BPW8 284 aa18.54■□□□□ 0.56
SSBP4-203ENST00000593641 NLKQ9UBE8 527 aa18.54■□□□□ 0.56
SSBP4-203ENST00000593641 TCRBV5S2A0A599 114 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 DCTN3O75935 186 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 GLRA1P23415 457 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 GABRA5P31644 462 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 GABRA2P47869 451 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 MNAT1P51948 309 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 FAM76BQ5HYJ3 339 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 DHFR2Q86XF0 187 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 ZNF454Q8N9F8 522 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 OTOSQ8NHW6 89 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 FAM81AQ8TBF8 368 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 THEM6Q8WUY1 208 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 HPSE2Q8WWQ2 592 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 MUC13Q9H3R2 512 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 ARL2BPQ9Y2Y0 163 aa18.53■□□□□ 0.56
SSBP4-203ENST00000593641 OR2AT4A6NND4 320 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 TFF1P04155 84 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 ACAA1P09110 424 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-203ENST00000593641 PSMA6P60900 246 aaKnown RBP18.52■□□□□ 0.56
SSBP4-203ENST00000593641 SLC35E4Q6ICL7 350 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 LCN8Q6JVE9 175 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 CD300LDQ6UXZ3 194 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 Q6ZTK2 550 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 BEND2Q8NDZ0 799 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 OR5D13Q8NGL4 314 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 DUS3LQ96G46 650 aaKnown RBP18.52■□□□□ 0.56
SSBP4-203ENST00000593641 FAM234AQ9H0X4 552 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 FBLN5Q9UBX5 448 aa18.52■□□□□ 0.56
SSBP4-203ENST00000593641 SF3B6Q9Y3B4 125 aaKnown RBP18.52■□□□□ 0.56
SSBP4-203ENST00000593641 PRR23D1E9PI22 279 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-203ENST00000593641 H0YAE9 185 aa18.51■□□□□ 0.55
SSBP4-203ENST00000593641 H3BUX3 64 aa18.51■□□□□ 0.55
SSBP4-203ENST00000593641 PRR23D2P0DMB1 279 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-203ENST00000593641 GPM6AP51674 278 aa18.51■□□□□ 0.55
SSBP4-203ENST00000593641 ARHGAP24Q8N264 748 aa18.51■□□□□ 0.55
SSBP4-203ENST00000593641 TMEM185AQ8NFB2 350 aa18.51■□□□□ 0.55
SSBP4-203ENST00000593641 OR51G2Q8NGK0 314 aa18.51■□□□□ 0.55
SSBP4-203ENST00000593641 LYZL4Q96KX0 146 aa18.51■□□□□ 0.55
SSBP4-203ENST00000593641 NIPAL2Q9H841 368 aa18.51■□□□□ 0.55
SSBP4-203ENST00000593641 PLXNB1O43157 2135 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 TRBV23-1A0A0A0MS06 115 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 SELENOFO60613 162 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 DCTDP32321 178 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 GNG3P63215 75 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 GK3PQ14409 553 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 HERPUD1Q15011 391 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 PLBD1Q6P4A8 553 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 OR8B12Q8NGG6 310 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 GIPC3Q8TF64 312 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 FEVQ99581 238 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 SSX3Q99909 188 aa18.5■□□□□ 0.55
SSBP4-203ENST00000593641 FGF23Q9GZV9 251 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-203ENST00000593641 ELL3Q9HB65 397 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-203ENST00000593641 ANGPTL7O43827 346 aa18.49■□□□□ 0.55
SSBP4-203ENST00000593641 C11orf88Q6PI97 169 aa18.49■□□□□ 0.55
SSBP4-203ENST00000593641 FAM185AQ8N0U4 392 aa18.49■□□□□ 0.55
SSBP4-203ENST00000593641 ZNRF1Q8ND25 227 aa18.49■□□□□ 0.55
SSBP4-203ENST00000593641 OR4C13Q8NGP0 309 aa18.49■□□□□ 0.55
SSBP4-203ENST00000593641 LRP12Q9Y561 859 aa18.49■□□□□ 0.55
SSBP4-203ENST00000593641 NOTCH3Q9UM47 2321 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 ARRDC5A6NEK1 342 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 B2RBV5 119 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 ZNF732B4DXR9 585 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 PRODHO43272 600 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 RHBDL1O75783 438 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 MAP2K3P46734 347 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 CAPZA1P52907 286 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 RPS7P62081 194 aaKnown RBP18.48■□□□□ 0.55
SSBP4-203ENST00000593641 TRIM25Q14258 630 aaKnown RBP18.48■□□□□ 0.55
SSBP4-203ENST00000593641 LY6EQ16553 131 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 CEP78Q5JTW2 689 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 KRT77Q7Z794 578 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 COMMD2Q86X83 199 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 ZNF671Q8TAW3 534 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 RAB18Q9NP72 206 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 MAB21L2Q9Y586 359 aa18.48■□□□□ 0.55
SSBP4-203ENST00000593641 IGKV1D-17A0A075B6S4 117 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 RAP2AP10114 183 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 PSG2P11465 335 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 LRRC75BQ2VPJ9 315 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 CEACAM21Q3KPI0 293 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 THAP5Q7Z6K1 395 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 OR2T6Q8NHC8 308 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 LRGUKQ96M69 825 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 OR51I2Q9H344 312 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 TAS2R1Q9NYW7 299 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 LAMP5Q9UJQ1 280 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 ZNF222Q9UK12 451 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 KLHDC2Q9Y2U9 406 aa18.47■□□□□ 0.55
SSBP4-203ENST00000593641 A0A1W2PPH5 198 aa18.46■□□□□ 0.55
SSBP4-203ENST00000593641 OR5B21A6NL26 309 aa18.46■□□□□ 0.55
SSBP4-203ENST00000593641 CST1P01037 141 aa18.46■□□□□ 0.55
SSBP4-203ENST00000593641 HMGN1P05114 100 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms