RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CYB5R3P00387 301 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-221ENST00000593026 SERPINA3P01011 423 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 MT-ND2P03891 347 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 THBS2P35442 1172 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 RBMXP38159 391 aaKnown RBP12.58□□□□□ -0.4
DDX39A-221ENST00000593026 PMELP40967 661 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 GPM6AP51674 278 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 CHN2P52757 468 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 GNG3P63215 75 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 IRF3Q14653 427 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 DMRTC1Q5HYR2 192 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 DMKNQ6E0U4 476 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-221ENST00000593026 PRSS48Q7RTY5 328 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 ZFP41Q8N8Y5 198 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 OR5A2Q8NGI9 324 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 TSEN15Q8WW01 171 aaKnown RBP12.58□□□□□ -0.4
DDX39A-221ENST00000593026 FGGYQ96C11 551 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 ADAT3Q96EY9 351 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-221ENST00000593026 CHST5Q9GZS9 411 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 FGF23Q9GZV9 251 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-221ENST00000593026 NARFLQ9H6Q4 476 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 DHDHQ9UQ10 334 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 NPTNQ9Y639 398 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 PNMA8CA0A1B0GUJ8 204 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 ZNF732B4DXR9 585 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 GABARAPL2P60520 117 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 BTG1P62324 171 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 BDH1Q02338 343 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 SPHARQ15513 63 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 MED22Q15528 200 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 ZNF826PQ6ZT77 177 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 GPR148Q8TDV2 347 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 RGP1Q92546 391 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-221ENST00000593026 TECTBQ96PL2 329 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 OR5M11Q96RB7 305 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 YTHDF1Q9BYJ9 559 aaKnown RBP12.57□□□□□ -0.4
DDX39A-221ENST00000593026 TLNRD1Q9H1K6 362 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 RNF7Q9UBF6 113 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 ZNF281Q9Y2X9 895 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 LSM2Q9Y333 95 aaKnown RBP12.57□□□□□ -0.4
DDX39A-221ENST00000593026 HIVEP1P15822 2718 aa12.57□□□□□ -0.4
DDX39A-221ENST00000593026 CR1P17927 2039 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 LRP5LA4QPB2 252 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 WNT9BO14905 357 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 ACSM1Q08AH1 577 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 DOC2BQ14184 412 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 ZMYND11Q15326 602 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 UBE2V2Q15819 145 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 FAM76BQ5HYJ3 339 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 CLDND2Q8NHS1 167 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 TRMT10AQ8TBZ6 339 aaKnown RBP12.56□□□□□ -0.4
DDX39A-221ENST00000593026 NPRL2Q8WTW4 380 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 GHSRQ92847 366 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 RPL3LQ92901 407 aaKnown RBP12.56□□□□□ -0.4
DDX39A-221ENST00000593026 GAL3ST1Q99999 423 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 SLC7A11Q9UPY5 501 aa12.56□□□□□ -0.4
DDX39A-221ENST00000593026 PQLC2LA1A4F0 135 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 CDIPTO14735 213 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 PLPP2O43688 288 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 ZNF205O95201 554 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 CD2P06729 351 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 HEXAP06865 529 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 OCM2P0CE71 109 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 OCMP0CE72 109 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-221ENST00000593026 CELP19835 753 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 SOX2P48431 317 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 CNN3Q15417 329 aaKnown RBP12.55□□□□□ -0.4
DDX39A-221ENST00000593026 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-221ENST00000593026 TMEM249Q2WGJ8 235 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 FAM201AQ5SY85 155 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 WDR82Q6UXN9 313 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 UTS2BQ765I0 119 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 ZNF573Q86YE8 665 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 C11orf53Q8IXP5 236 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 MUC20Q8N307 709 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-221ENST00000593026 BOLLQ8N9W6 283 aaKnown RBP12.55□□□□□ -0.4
DDX39A-221ENST00000593026 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 LRRC29Q8WV35 223 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 PGLYRP3Q96LB9 341 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 OR51I2Q9H344 312 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 F8P00451 2351 aa12.55□□□□□ -0.4
DDX39A-221ENST00000593026 ZNF469Q96JG9 3925 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-221ENST00000593026 PPIAL4EA0A075B759 164 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 FAM230AA0A1W2PPH8 454 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 PPIAL4DF5H284 164 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 MRPS14O60783 128 aaKnown RBP12.54□□□□□ -0.4
DDX39A-221ENST00000593026 CD1AP06126 327 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 PPIAL4FP0DN26 164 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 CD80P33681 288 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 CFHR2P36980 270 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 MDH2P40926 338 aaKnown RBP12.54□□□□□ -0.4
DDX39A-221ENST00000593026 MAP2K4P45985 399 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 FUT6P51993 359 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 TMEM155Q4W5P6 130 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 YIF1BQ5BJH7 314 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 HAGHLQ6PII5 290 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-221ENST00000593026 LRRC28Q86X40 367 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-221ENST00000593026 SERPINA12Q8IW75 414 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms