RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 L7N2F9 121 aa17.16■□□□□ 0.34
MBD3-209ENST00000592012 IFNA7P01567 189 aa17.16■□□□□ 0.34
MBD3-209ENST00000592012 PRSS12P56730 875 aa17.16■□□□□ 0.34
MBD3-209ENST00000592012 TRIP6Q15654 476 aaKnown RBP17.16■□□□□ 0.34
MBD3-209ENST00000592012 VAX1Q5SQQ9 334 aa17.16■□□□□ 0.34
MBD3-209ENST00000592012 LINC00470Q9BZP3 86 aa17.16■□□□□ 0.34
MBD3-209ENST00000592012 SLC7A10Q9NS82 523 aa17.16■□□□□ 0.34
MBD3-209ENST00000592012 SP1P08047 785 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 C4BPBP20851 252 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 PPP1R1AQ13522 171 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 ARFRP1Q13795 201 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 GK2Q14410 553 aaPredicted RBP17.15■□□□□ 0.34
MBD3-209ENST00000592012 HOGA1Q86XE5 327 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 TUSC5Q8IXB3 177 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 ST8SIA4Q92187 359 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 ELL3Q9HB65 397 aaPredicted RBP17.15■□□□□ 0.34
MBD3-209ENST00000592012 ZNF391Q9UJN7 358 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 KMT2EQ8IZD2 1858 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 FARS2O95363 451 aaKnown RBP17.15■□□□□ 0.34
MBD3-209ENST00000592012 IL2RAP01589 272 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 CD34P28906 385 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 FAHD2BQ6P2I3 314 aaPredicted RBP17.15■□□□□ 0.34
MBD3-209ENST00000592012 LYG2Q86SG7 212 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 MDS2Q8NDY4 140 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 TERB2Q8NHR7 220 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 FAHD2AQ96GK7 314 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 IRF2BPLQ9H1B7 796 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 PARPBPQ9NWS1 579 aa17.15■□□□□ 0.34
MBD3-209ENST00000592012 EP300Q09472 2414 aaPredicted RBP17.14■□□□□ 0.33
MBD3-209ENST00000592012 IGKV1-27A0A075B6S5 117 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 ARPC5O15511 151 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 NOS1APO75052 506 aaPredicted RBP17.14■□□□□ 0.33
MBD3-209ENST00000592012 CBX5P45973 191 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 PLGLB1Q02325 96 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 TMEM42Q69YG0 159 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 ADAD2Q8NCV1 583 aaKnown RBP17.14■□□□□ 0.33
MBD3-209ENST00000592012 CPEB3Q8NE35 698 aaKnown RBP17.14■□□□□ 0.33
MBD3-209ENST00000592012 FNDC9Q8TBE3 224 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 CITED4Q96RK1 184 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 PECRQ9BY49 303 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 RGCCQ9H4X1 137 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 NOP16Q9Y3C1 178 aaKnown RBP17.14■□□□□ 0.33
MBD3-209ENST00000592012 C9orf170A2RU37 121 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 OR6C65A6NJZ3 312 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 EFSO43281 561 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 NME2P1O60361 137 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 NME2P22392 152 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 CPT2P23786 658 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 FAM3AP98173 230 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 ZNF92Q03936 586 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 ACTBL2Q562R1 376 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 PABPC1L2AQ5JQF8 200 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 ARRDC1Q8N5I2 433 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 OR5M8Q8NGP6 311 aa17.14■□□□□ 0.33
MBD3-209ENST00000592012 ZNF230Q9UIE0 474 aaPredicted RBP17.14■□□□□ 0.33
MBD3-209ENST00000592012 OTOGLQ3ZCN5 2332 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 SYNGR4O95473 234 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 TMEM225BP0DP42 221 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 MEOX1P50221 254 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 GMFBP60983 142 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 IL13RA1P78552 427 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 ARF1P84077 181 aaKnown RBP17.13■□□□□ 0.33
MBD3-209ENST00000592012 ATP1A1-AS1Q5TC04 95 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 MARCH1Q8TCQ1 289 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 MITD1Q8WV92 249 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 ST6GALNAC5Q9BVH7 336 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 CALHM2Q9HA72 323 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 UBQLN2Q9UHD9 624 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 MCTS1Q9ULC4 181 aaKnown RBP17.13■□□□□ 0.33
MBD3-209ENST00000592012 KLF13Q9Y2Y9 288 aaPredicted RBP17.13■□□□□ 0.33
MBD3-209ENST00000592012 FXYD6-FXYD2A0A087WZ82 144 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 hCG_38984A0A1B0GV85 526 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 FAM230AA0A1W2PPH8 454 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 SERPINE3A8MV23 424 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 RPL36A-HNRNPH2H7BZ11 118 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 ZNF24P17028 368 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 PRKACBP22694 351 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 SORDQ00796 357 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 SRSF4Q08170 494 aaKnown RBP17.13■□□□□ 0.33
MBD3-209ENST00000592012 CNN3Q15417 329 aaKnown RBP17.13■□□□□ 0.33
MBD3-209ENST00000592012 ZNF100Q8IYN0 542 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 FXYD6Q9H0Q3 95 aa17.13■□□□□ 0.33
MBD3-209ENST00000592012 LINC00862A6NCI5 91 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 CD8AP01732 235 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 PPP3CBP16298 524 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 HLA-GP17693 338 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 S100A11P31949 105 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 LPCAT3Q6P1A2 487 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 SUMF1Q8NBK3 374 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 Q96M66 194 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 BCO1Q9HAY6 547 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 KCNN3Q9UGI6 736 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 MAB21L2Q9Y586 359 aa17.12■□□□□ 0.33
MBD3-209ENST00000592012 URB1O60287 2271 aaKnown RBP17.12■□□□□ 0.33
MBD3-209ENST00000592012 RPS10-NUDT3A0A1W2PQS6 291 aa17.11■□□□□ 0.33
MBD3-209ENST00000592012 RFPL4AA6NLU0 287 aa17.11■□□□□ 0.33
MBD3-209ENST00000592012 CEACAM18A8MTB9 384 aa17.11■□□□□ 0.33
MBD3-209ENST00000592012 RFPL4AL1F8VTS6 287 aa17.11■□□□□ 0.33
MBD3-209ENST00000592012 KLRC4-KLRK1H3BQV0 150 aa17.11■□□□□ 0.33
MBD3-209ENST00000592012 ANGPTL7O43827 346 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms