RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 UBE3DQ7Z6J8 389 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 OR2T6Q8NHC8 308 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 SEH1LQ96EE3 360 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 GINS3Q9BRX5 216 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 IL20Q9NYY1 176 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 SLC25A10Q9UBX3 287 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-212ENST00000591126 PURGQ9UJV8 347 aaKnown RBP5.54□□□□□ -1.52
SMAD4-212ENST00000591126 FBXL2Q9UKC9 423 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 TBC1D24Q9ULP9 559 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF785A8K8V0 405 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 SIRPB1O00241 398 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 MGST3O14880 152 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 NGFP01138 241 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 CT62P0C5K7 136 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 MAKP20794 623 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 GALP22466 123 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 IST1P53990 364 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 FXYD4P59646 89 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 MEF2CQ06413 473 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-212ENST00000591126 KIAA0040Q15053 153 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 BRICD5Q6PL45 260 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 KDM8Q8N371 416 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 TCTEX1D1Q8N7M0 179 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 OR8G5Q8NG78 346 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 OR4M1Q8NGD0 313 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 OR4C12Q96R67 309 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 SIGLEC11Q96RL6 698 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 TTTY10Q9BZA0 68 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 PKIBQ9C010 78 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 CHODLQ9H9P2 273 aa5.54□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A10PA6NDY2 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A18PA6NE21 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A16PA6NEW6 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A20PA6NIJ5 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A8PA6NJQ4 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A7PA6NKC0 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A22PA8MWA6 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A12PA8MX19 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A5PA8MXJ8 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A23PA8MXZ1 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A15PP0C7V4 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A13PP0C7W8 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A14PP0C7W9 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM90A24PP0C7X0 464 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 LIMS1P48059 325 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 RFX2P48378 723 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 LSM11P83369 360 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 CEBPEQ15744 281 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ELP2Q6IA86 826 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF511Q8NB15 262 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ARL11Q969Q4 196 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 OR2S2Q9NQN1 319 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 BET1O15155 118 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 GPX5O75715 221 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 TPPPO94811 219 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 BGLAPP02818 100 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 HNRNPCP07910 306 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 UMODP07911 640 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FGF2P09038 288 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 OR8U8P0C7N1 319 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 AZGP1P25311 298 aaKnown RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 AQP4P55087 323 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 TAS2R45P59539 299 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 SNTB1Q13884 538 aaKnown RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 OGFRL1Q5TC84 451 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 HSD17B13Q7Z5P4 300 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 GLYATL2Q8WU03 294 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 WDYHV1Q96HA8 205 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 C20orf85Q9H1P6 137 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ASCL3Q9NQ33 180 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 HEYLQ9NQ87 328 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 NLKQ9UBE8 527 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 PRELID1Q9Y255 219 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ST3GAL6Q9Y274 331 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 A0A1B0GUS0 222 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 TRDV1A0A1B0GX56 115 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 A0A1W2PS18 150 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 SMAD7O15105 426 aaKnown RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 SMAD9O15198 467 aaKnown RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 SNAP29O95721 258 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 GNB3P16520 340 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 CA6P23280 308 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 PSMB10P40306 273 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ID1P41134 155 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 CAV3P56539 151 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 TAS2R30P59541 319 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 RPL11P62913 178 aaKnown RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 NAAAQ02083 359 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 DYRK1AQ13627 763 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 ZNF774Q6NX45 483 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 Q6ZRG5 221 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 MOGAT3Q86VF5 341 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 DTX1Q86Y01 620 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 FAM216AQ8WUB2 273 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 TMEM230Q96A57 120 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 DUS3LQ96G46 650 aaKnown RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 UHRF2Q96PU4 802 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 GSKIPQ9P0R6 139 aa5.53□□□□□ -1.52
SMAD4-212ENST00000591126 RALYQ9UKM9 306 aaKnown RBP5.53□□□□□ -1.52
SMAD4-212ENST00000591126 SIGLEC7Q9Y286 467 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms