RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 METTL17Q9H7H0 456 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-211ENST00000590499 MOB1AQ9H8S9 216 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 RNPEPL1Q9HAU8 725 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 ABCB9Q9NP78 766 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 GPR84Q9NQS5 396 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 MIOXQ9UGB7 285 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 ORC6Q9Y5N6 252 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 INSIG2Q9Y5U4 225 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 R4GMQ9 66 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 A0A1W2PQL4 384 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-211ENST00000590499 OOEPA6NGQ2 149 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 A6NLC8 198 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 ZNF850A8MQ14 1090 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 J3QRE1 110 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 ENTPD6O75354 484 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 OR2T7P0C7T2 308 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 ATP6V1B1P15313 513 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 GABRB1P18505 474 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 CD80P33681 288 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 GNALP38405 381 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 ISL1P61371 349 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 IL5RAQ01344 420 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 ZIK1Q3SY52 487 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-211ENST00000590499 LCE5AQ5TCM9 118 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 TEX36Q5VZQ5 186 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 WDR82Q6UXN9 313 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 PLEKHG7Q6ZR37 379 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 FAM90A1Q86YD7 464 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 TEX29Q8N6K0 151 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 OR8B3Q8NGG8 313 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 OR2T27Q8NH04 317 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 OR51E1Q8TCB6 317 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 RFKQ969G6 155 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 OR8B2Q96RD0 313 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 TBX5Q99593 518 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 MICU1Q9BPX6 476 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 C9orf16Q9BUW7 83 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 KRTAP17-1Q9BYP8 105 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 IMPAD1Q9NX62 359 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 CTSZQ9UBR2 303 aa9.33□□□□□ -0.92
SMAD4-211ENST00000590499 TRAV38-1A0A0B4J264 116 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 ZNF816-ZNF321PA0A0X1KG74 233 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 A0A1B0GTI1 187 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 TMEM210A6NLX4 147 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 ANXA2P2A6NMY6 339 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 LOC110117498-PIK3R3F6TDL0 507 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 FCN3O75636 299 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 SULT1C4O75897 302 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 DHRS3O75911 302 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 ADRA2CP18825 462 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 CCL1P22362 96 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 PITPNBP48739 271 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 SRSF2Q01130 221 aaKnown RBP9.32□□□□□ -0.92
SMAD4-211ENST00000590499 ZNF85Q03923 595 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 PAX8Q06710 450 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 KRTAP24-1Q3LI83 254 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 WDR25Q64LD2 544 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-211ENST00000590499 SFRP4Q6FHJ7 346 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-211ENST00000590499 NLRC3Q7RTR2 1065 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 ZDHHC23Q8IYP9 409 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 ELMOD2Q8IZ81 293 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 SEMA6DQ8NFY4 1073 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 OR10H4Q8NGA5 316 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 LRRC29Q8WV35 223 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 PIGCQ92535 297 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 FAM71F1Q96KD3 344 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-211ENST00000590499 RTL8AQ9BWD3 113 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 TRIM36Q9NQ86 728 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 OR5V1Q9UGF6 321 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 OR52A1Q9UKL2 312 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMAD4-211ENST00000590499 SNX5Q9Y5X3 404 aa9.32□□□□□ -0.92
SMAD4-211ENST00000590499 IGHV2-70DA0A0C4DH43 119 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 hCG_1807616A0A1W2PRN6 198 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 RNF212BA8MTL3 300 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 SRRM5B3KS81 715 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 C22orf46C9J442 243 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 DLGAP1O14490 977 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 CDIPTO14735 213 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 KRT8P05787 483 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 FAHP16930 419 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 MTNR1AP48039 350 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 GNB2P62879 340 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 RIPPLY1Q0D2K3 151 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 KCNJ8Q15842 424 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 KLF17Q5JT82 389 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-211ENST00000590499 BCL2L15Q5TBC7 163 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 LIPNQ5VXI9 398 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 MEDAGQ5VYS4 303 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 TMEM42Q69YG0 159 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 ZBTB49Q6ZSB9 765 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 CATSPERDQ86XM0 798 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 PHC2Q8IXK0 858 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 ENTHD1Q8IYW4 607 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 BOLLQ8N9W6 283 aaKnown RBP9.31□□□□□ -0.92
SMAD4-211ENST00000590499 OR10Z1Q8NGY1 313 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 NANPQ8TBE9 248 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 RAB40AQ8WXH6 277 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 TMEM158Q8WZ71 300 aa9.31□□□□□ -0.92
SMAD4-211ENST00000590499 RORBQ92753 470 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms