RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 WIPF1O43516 503 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 TTRP02766 147 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 PAX6P26367 422 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 CEBPDP49716 269 aaPredicted RBP13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 ROM1Q03395 351 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 MICBQ29980 383 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 FAM76BQ5HYJ3 339 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 C16orf87Q6PH81 154 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 FIP1L1Q6UN15 594 aaKnown RBP13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 ZDHHC23Q8IYP9 409 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 OR5K1Q8NHB7 308 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 ANGPTL6Q8NI99 470 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 C17orf50Q8WW18 174 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 LRTOMTQ8WZ04 291 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 ZDHHC16Q969W1 377 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 TMIGD2Q96BF3 282 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 OR51I2Q9H344 312 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 RGCCQ9H4X1 137 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 C1RLQ9NZP8 487 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 MRM2Q9UI43 246 aaKnown RBP13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 ZNF222Q9UK12 451 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 SLC22A13Q9Y226 551 aa13.84□□□□□ -0.19
CROCCP3-203ENST00000589964 TMEM269A0A1B0GVZ9 245 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 ZNF732B4DXR9 585 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 SYNGR1O43759 233 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 APOC1P02654 83 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 MUC1P15941 1255 aaPredicted RBP13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 CFL1P23528 166 aaKnown RBP13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 IL5RAQ01344 420 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 FOXL1Q12952 345 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 KCNJ8Q15842 424 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 METTL11BQ5VVY1 283 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 CD276Q5ZPR3 534 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 KDM4DQ6B0I6 523 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 ZNF788Q6ZQV5 615 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 TNFRSF14Q92956 283 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 TBX5Q99593 518 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 CIB1Q99828 191 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 CNTD2Q9H8S5 307 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 MAB21L2Q9Y586 359 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 MPC1Q9Y5U8 109 aa13.83□□□□□ -0.2
CROCCP3-203ENST00000589964 ZNF816-ZNF321PA0A0X1KG74 233 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 ANXA2P2A6NMY6 339 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 KCNAB3O43448 404 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 NDUFA2O43678 99 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 ERVFRD-1P60508 538 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 HCP5Q6MZN7 132 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 MOB3CQ70IA8 216 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 KRT74Q7RTS7 529 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 SLC35F2Q8IXU6 374 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 KIR3DL3Q8N743 410 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 PNLDC1Q8NA58 520 aaKnown RBP13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 ZNRF1Q8ND25 227 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 FAM81AQ8TBF8 368 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 H1FXQ92522 213 aaKnown RBP13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 UBE2FQ969M7 185 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 RNF166Q96A37 237 aaPredicted RBP13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 NRBF2Q96F24 287 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 CNN2Q99439 309 aaKnown RBP13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 DCTN5Q9BTE1 182 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 YY1AP1Q9H869 796 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 GPR173Q9NS66 373 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 KRT84Q9NSB2 600 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 ACOXLQ9NUZ1 547 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 NUFIP1Q9UHK0 495 aaKnown RBP13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 IKZF2Q9UKS7 526 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 WNK1Q9H4A3 2382 aa13.82□□□□□ -0.2
CROCCP3-203ENST00000589964 CMYA5Q8N3K9 4069 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 A0A0U1RQV5 110 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 PSG2P11465 335 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 CXCR4P61073 352 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 MZT1Q08AG7 82 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 TAF9Q16594 264 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 CDONQ4KMG0 1287 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 ATPAF1Q5TC12 328 aaPredicted RBP13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 HIST2H2BDQ6DRA6 164 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 HAGHLQ6PII5 290 aaPredicted RBP13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 ZNF322Q6U7Q0 402 aaPredicted RBP13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 MEPCEQ7L2J0 689 aaKnown RBP13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 COMMD2Q86X83 199 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 ZNF679Q8IYX0 411 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 CD177Q8N6Q3 437 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 TMEM163Q8TC26 289 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 GATAD2BQ8WXI9 593 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 AQP3Q92482 292 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 AJUBAQ96IF1 538 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 GABARAPL1Q9H0R8 117 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 ZMAT3Q9HA38 289 aaKnown RBP13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 TRIM36Q9NQ86 728 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 NLKQ9UBE8 527 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 GTF2A1LQ9UNN4 478 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 PIGLQ9Y2B2 252 aa13.81□□□□□ -0.2
CROCCP3-203ENST00000589964 MEX3AA1L020 520 aaKnown RBP13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 SAC3D1A6NKF1 404 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 TMEM210A6NLX4 147 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 OR2AT4A6NND4 320 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 SIGLEC5O15389 551 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 LIPFP07098 398 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 ODF4Q2M2E3 257 aa13.8□□□□□ -0.2
CROCCP3-203ENST00000589964 CEACAM21Q3KPI0 293 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms