RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 CCDC28AQ8IWP9 274 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 SLC43A2Q8N370 569 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 OR52R1Q8NGF1 315 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 SPRYD4Q8WW59 207 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-209ENST00000589941 TMEM203Q969S6 136 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 GIMAP5Q96F15 307 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 CMTM3Q96MX0 182 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 FAIM2Q9BWQ8 316 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 KCNN2Q9H2S1 579 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 RANBP3Q9H6Z4 567 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-209ENST00000589941 EGLN3Q9H6Z9 239 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 EVA1AQ9H8M9 152 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 ZCCHC3Q9NUD5 404 aaKnown RBP6.54□□□□□ -1.36
SMAD4-209ENST00000589941 MCUBQ9NWR8 336 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 SLCO1C1Q9NYB5 712 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 COPZ2Q9P299 210 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 NLKQ9UBE8 527 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 COMMD3Q9UBI1 195 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 ZNF69Q9UC07 566 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 ICAM5Q9UMF0 924 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 NUBP2Q9Y5Y2 271 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 STAB2Q8WWQ8 2551 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 FRAS1Q86XX4 4008 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 A0A1B0GVI7 797 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 RPS10-NUDT3A0A1W2PQS6 291 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 CGB1A6NKQ9 187 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 LINC01548A6NM66 108 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 TIMM23O14925 209 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 AKR7A2O43488 359 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 PLPP2O43688 288 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 FADS1O60427 444 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 FMO6PO60774 539 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 SLC22A5O76082 557 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 THY1P04216 161 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 SULT1A3P0DMM9 295 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 SULT1A4P0DMN0 295 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 CT45A8P0DMV1 189 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 CT45A9P0DMV2 189 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 TFPIP10646 304 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 CPMP14384 443 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 RPS4Y1P22090 263 aaKnown RBP6.53□□□□□ -1.36
SMAD4-209ENST00000589941 AHCYP23526 432 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 SFTPDP35247 375 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 DIO1P49895 249 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 CAV3P56539 151 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 TAS2R43P59537 309 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 DHODHQ02127 395 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 PRICKLE4Q2TBC4 344 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 SLC36A2Q495M3 483 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 TRMT12Q53H54 448 aaKnown RBP6.53□□□□□ -1.36
SMAD4-209ENST00000589941 CT45A2Q5DJT8 189 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 CEP78Q5JTW2 689 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 FAM209BQ5JX69 171 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 NIPAL3Q6P499 406 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 RFPL4BQ6ZWI9 263 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 HDDC2Q7Z4H3 204 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 ACBD7Q8N6N7 88 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 WDR31Q8NA23 367 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 SLC37A3Q8NCC5 494 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 OR4M2Q8NGB6 313 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 OR5D16Q8NGK9 328 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 OR5H6Q8NGV6 325 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 SUN5Q8TC36 379 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 RPS4Y2Q8TD47 263 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 DDB2Q92466 427 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 RFT1Q96AA3 541 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 EXOSC8Q96B26 276 aaKnown RBP6.53□□□□□ -1.36
SMAD4-209ENST00000589941 OTULINQ96BN8 352 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 DAZAP1Q96EP5 407 aaKnown RBP6.53□□□□□ -1.36
SMAD4-209ENST00000589941 ZNF681Q96N22 645 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 WACQ9BTA9 647 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 TEX12Q9BXU0 123 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 SLC25A32Q9H2D1 315 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 PLK3Q9H4B4 646 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 PLEKHA1Q9HB21 404 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 HINT3Q9NQE9 182 aaKnown RBP6.53□□□□□ -1.36
SMAD4-209ENST00000589941 LYARQ9NX58 379 aaKnown RBP6.53□□□□□ -1.36
SMAD4-209ENST00000589941 BABAM2Q9NXR7 383 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 HAO2Q9NYQ3 351 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 IL20RAQ9UHF4 553 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 NUP50Q9UKX7 468 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 TANC2Q9HCD6 1990 aa6.53□□□□□ -1.36
SMAD4-209ENST00000589941 MEIKINA0A087WXM9 373 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 TRAV1-2A0A0B4J238 106 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 LINC00854A0A1B0GVQ3 168 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 MDFIC2A0A1B0GVS7 189 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 C12orf71A8MTZ7 269 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 BHLHE40O14503 412 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 LANCL1O43813 399 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 NOS1APO75052 506 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-209ENST00000589941 SNAPC5O75971 98 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 TPPPO94811 219 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 AGR2O95994 175 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 DHFRP00374 187 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 PAHP00439 452 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 TFP02787 698 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 HMGN2P05204 90 aaKnown RBP6.52□□□□□ -1.37
SMAD4-209ENST00000589941 GUSBP08236 651 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 OR4A8P0C604 315 aa6.52□□□□□ -1.37
SMAD4-209ENST00000589941 CELP19835 753 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms