RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 FAM183AA6NL82 134 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 OR2AT4A6NND4 320 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 ZNF850A8MQ14 1090 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 RHBDL1O75783 438 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 APOC1P02654 83 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 ATP6V1B2P21281 511 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 PAX6P26367 422 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 PPP1R8Q12972 351 aaKnown RBP14.97□□□□□ -0.01
CCDC43-204ENST00000588687 AANATQ16613 207 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 ERI1Q8IV48 349 aaKnown RBP14.97□□□□□ -0.01
CCDC43-204ENST00000588687 C11orf44Q8N8P7 122 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 PIFOQ8TCI5 191 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 MED30Q96HR3 178 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 DGCR6LQ9BY27 220 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 MEGF9Q9H1U4 602 aa14.97□□□□□ -0.01
CCDC43-204ENST00000588687 TRBV23-1A0A0A0MS06 115 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 A0A1W2PQ09 198 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 CCNB2O95067 398 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 SNCBQ16143 134 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 LY6EQ16553 131 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 LRRC75BQ2VPJ9 315 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 FTMTQ8N4E7 242 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 C11orf42Q8N5U0 333 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 ZNRF1Q8ND25 227 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 OR4C13Q8NGP0 309 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 PGAM5Q96HS1 289 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 ABCB9Q9NP78 766 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 BRD7Q9NPI1 651 aa14.96□□□□□ -0.01
CCDC43-204ENST00000588687 TCRBV5S2A0A599 114 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 RIIAD1A6NNX1 92 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 PIN1P1O15428 100 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 PSG2P11465 335 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 ZNF3P17036 446 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 NDUFB7P17568 137 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 GSTT1P30711 240 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 PSMA6P60900 246 aaKnown RBP14.95□□□□□ -0.02
CCDC43-204ENST00000588687 OR8B12Q8NGG6 310 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 OR51G2Q8NGK0 314 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 OR5D13Q8NGL4 314 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 WIPF2Q8TF74 440 aaPredicted RBP14.95□□□□□ -0.02
CCDC43-204ENST00000588687 SDSLQ96GA7 329 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 CDRT15Q96T59 188 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 ELAC2Q9BQ52 826 aaKnown RBP14.95□□□□□ -0.02
CCDC43-204ENST00000588687 C19orf12Q9NSK7 152 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 KLHDC2Q9Y2U9 406 aa14.95□□□□□ -0.02
CCDC43-204ENST00000588687 SF3B6Q9Y3B4 125 aaKnown RBP14.95□□□□□ -0.02
CCDC43-204ENST00000588687 ANGPTL7O43827 346 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 GLCEO94923 617 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 IFNGP01579 166 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 FAM189A2Q15884 450 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 REC114Q7Z4M0 266 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 ZDHHC23Q8IYP9 409 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 IQCF1Q8N6M8 205 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 OR5K1Q8NHB7 308 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 OTOSQ8NHW6 89 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 RNF170Q96K19 258 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 OR51I2Q9H344 312 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 ZNF702PQ9H963 129 aa14.94□□□□□ -0.02
CCDC43-204ENST00000588687 ADARB2-AS1A8MUL3 147 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 SELENOFO60613 162 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 H2BFMP0C1H6 154 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 GLRA1P23415 457 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 GPM6AP51674 278 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 BLMHQ13867 455 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 MICAQ29983 383 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 CD300LDQ6UXZ3 194 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 CYP2R1Q6VVX0 501 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 SHFQ7M4L6 423 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 MKXQ8IYA7 352 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 Q8N2B8 174 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 TMEM185AQ8NFB2 350 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 OR2T6Q8NHC8 308 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 PIGCQ92535 297 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 NIPSNAP1Q9BPW8 284 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 FAM234AQ9H0X4 552 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 SERTAD4Q9NUC0 356 aa14.93□□□□□ -0.02
CCDC43-204ENST00000588687 H0YAE9 185 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 SNX3O60493 162 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 MTRF1O75570 445 aaKnown RBP14.92□□□□□ -0.02
CCDC43-204ENST00000588687 LYNP07948 512 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 BMXP51813 675 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 SPATS1Q496A3 300 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 OXLD1Q5BKU9 147 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 LIAT1Q6ZQX7 453 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 KCTD8Q6ZWB6 473 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 FAM185AQ8N0U4 392 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 AQP3Q92482 292 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 NPFFR1Q9GZQ6 430 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 RAB18Q9NP72 206 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 ACTR3BQ9P1U1 418 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 LRP12Q9Y561 859 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 U3KQV3 271 aa14.92□□□□□ -0.02
CCDC43-204ENST00000588687 VGLL3A8MV65 326 aa14.91□□□□□ -0.02
CCDC43-204ENST00000588687 ALX3O95076 343 aa14.91□□□□□ -0.02
CCDC43-204ENST00000588687 IGLV3-1P01715 115 aa14.91□□□□□ -0.02
CCDC43-204ENST00000588687 GABRA2P47869 451 aa14.91□□□□□ -0.02
CCDC43-204ENST00000588687 GNG3P63215 75 aa14.91□□□□□ -0.02
CCDC43-204ENST00000588687 HABP2Q14520 560 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-204ENST00000588687 TRPM8Q7Z2W7 1104 aa14.91□□□□□ -0.02
CCDC43-204ENST00000588687 LYG1Q8N1E2 194 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms