RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 WDR38Q5JTN6 314 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 CLVS2Q5SYC1 327 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 TEX36Q5VZQ5 186 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 LPCAT4Q643R3 524 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 WDR25Q64LD2 544 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-207ENST00000587256 C1orf229Q6ZS94 237 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-207ENST00000587256 ACBD7Q8N6N7 88 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 SCCPDHQ8NBX0 429 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 NANPQ8TBE9 248 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 CYGBQ8WWM9 190 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 LGALS12Q96DT0 336 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 MRPL48Q96GC5 212 aaKnown RBP12.36□□□□□ -0.43
ATG4D-207ENST00000587256 ADI1Q9BV57 179 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 C8orf4Q9NR00 106 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 GPR173Q9NS66 373 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 CTSZQ9UBR2 303 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 DNAJB11Q9UBS4 358 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 INSIG2Q9Y5U4 225 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 AUP1Q9Y679 476 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 V9GYS6 101 aa12.36□□□□□ -0.43
ATG4D-207ENST00000587256 ARHGAP32A7KAX9 2087 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 IGHV2-70DA0A0C4DH43 119 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 A0A1B0GTI1 187 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 LOC107986453A0A1B0GWG9 222 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 DHRS7CA6NNS2 312 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 SRRM5B3KS81 715 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 TMPRSS2O15393 492 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 SLC16A6O15403 523 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 TCF21O43680 179 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 NRASP01111 189 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 UBCP0CG48 685 aaKnown RBP12.35□□□□□ -0.43
ATG4D-207ENST00000587256 MUC1P15941 1255 aaPredicted RBP12.35□□□□□ -0.43
ATG4D-207ENST00000587256 CCL1P22362 96 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 NPY4RP50391 375 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 GABPB1Q06547 395 aaPredicted RBP12.35□□□□□ -0.43
ATG4D-207ENST00000587256 CDONQ4KMG0 1287 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 PACRGLQ8N7B6 248 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 OR5A2Q8NGI9 324 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 OR10Z1Q8NGY1 313 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 RHOXF1Q8NHV9 184 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 MYCBPQ99417 103 aaPredicted RBP12.35□□□□□ -0.43
ATG4D-207ENST00000587256 MDFIQ99750 246 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 AMBNQ9NP70 447 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 OPN4Q9UHM6 478 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 EXOGQ9Y2C4 368 aaKnown RBP12.35□□□□□ -0.43
ATG4D-207ENST00000587256 CUBNO60494 3623 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 MXRA5Q9NR99 2828 aa12.35□□□□□ -0.43
ATG4D-207ENST00000587256 A6NIN4 97 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 NKX6-3A6NJ46 265 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 J3QRE1 110 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 AKR7A2O43488 359 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 ENSAO43768 121 aaKnown RBP12.34□□□□□ -0.43
ATG4D-207ENST00000587256 FADS2O95864 444 aaKnown RBP12.34□□□□□ -0.43
ATG4D-207ENST00000587256 CFHR2P36980 270 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 OR12D2P58182 307 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 ISL1P61371 349 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 HAGHLQ6PII5 290 aaPredicted RBP12.34□□□□□ -0.43
ATG4D-207ENST00000587256 ZNF841Q6ZN19 808 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 KRT74Q7RTS7 529 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 PRSS35Q8N3Z0 413 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 RAB40AQ8WXH6 277 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 TMEM158Q8WZ71 300 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 C12orf43Q96C57 262 aaKnown RBP12.34□□□□□ -0.43
ATG4D-207ENST00000587256 SEH1LQ96EE3 360 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 C4orf36Q96KX1 117 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 NUDT16L1Q9BRJ7 211 aaKnown RBP12.34□□□□□ -0.43
ATG4D-207ENST00000587256 ALG8Q9BVK2 526 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 OR51I2Q9H344 312 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 SMURF1Q9HCE7 757 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 RPL36Q9Y3U8 105 aaKnown RBP12.34□□□□□ -0.43
ATG4D-207ENST00000587256 COL6A5A8TX70 2615 aa12.34□□□□□ -0.43
ATG4D-207ENST00000587256 ANKRD61A6NGH8 418 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 C22orf46C9J442 243 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-207ENST00000587256 J3QLW9 94 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 DLGAP1O14490 977 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 RHBDL1O75783 438 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 RGS9O75916 674 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-207ENST00000587256 HTR1AP08908 422 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 ZNF19P17023 458 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 GLRA1P23415 457 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 KIR3DL2P43630 455 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 SRSF2Q01130 221 aaKnown RBP12.33□□□□□ -0.44
ATG4D-207ENST00000587256 RAB40BQ12829 278 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 FAM76BQ5HYJ3 339 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 TTC23Q5W5X9 447 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 CD276Q5ZPR3 534 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 TMEM42Q69YG0 159 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 SLC36A1Q7Z2H8 476 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 BPIFB2Q8N4F0 458 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 FAM216BQ8N7L0 139 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 CCDC54Q8NEL0 328 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 OR2G2Q8NGZ5 317 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 ZNF418Q8TF45 676 aaPredicted RBP12.33□□□□□ -0.44
ATG4D-207ENST00000587256 ST8SIA4Q92187 359 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 CCL13Q99616 98 aa12.33□□□□□ -0.44
ATG4D-207ENST00000587256 WDR13Q9H1Z4 485 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms