RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 IGHV1-18A0A0C4DH31 117 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 ZNF503-AS2A6NEH8 195 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 CD300LBA8K4G0 201 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 ZNF850A8MQ14 1090 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 ATXN7O15265 892 aaPredicted RBP5.34□□□□□ -1.55
LIG3-206ENST00000586058 GMDSO60547 372 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 WISP2O76076 250 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 MPIG6BO95866 241 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 PTTG1O95997 202 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 PAHP00439 452 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 PLATP00750 562 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 CST4P01036 141 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 IGLV1-44P01699 117 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 CELA3BP08861 270 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 IL7P13232 177 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 PRF1P14222 555 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 KLF3P57682 345 aaPredicted RBP5.34□□□□□ -1.55
LIG3-206ENST00000586058 GNG3P63215 75 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 NAAAQ02083 359 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 OR8G1Q15617 311 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 TAB1Q15750 504 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 C2orf76Q3KRA6 126 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 SPATA46Q5T0L3 261 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 ZNF529Q6P280 563 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 ZNF474Q6S9Z5 364 aaPredicted RBP5.34□□□□□ -1.55
LIG3-206ENST00000586058 GLIPR1L1Q6UWM5 242 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 SEZ6L2Q6UXD5 910 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 KRT74Q7RTS7 529 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 ZNF573Q86YE8 665 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 WFDC8Q8IUA0 241 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 SNX29P2Q8IUI4 249 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 Q8IYB0 196 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 TOMM5Q8N4H5 51 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 SPERTQ8NA61 448 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 POC5Q8NA72 575 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 RELL2Q8NC24 303 aaPredicted RBP5.34□□□□□ -1.55
LIG3-206ENST00000586058 GALNT11Q8NCW6 608 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 OR4M1Q8NGD0 313 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 OR5A2Q8NGI9 324 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 OR5D18Q8NGL1 313 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 OR5H6Q8NGV6 325 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 SLC25A40Q8TBP6 338 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 FCAMRQ8WWV6 532 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 ZC3HAV1LQ96H79 300 aaKnown RBP5.34□□□□□ -1.55
LIG3-206ENST00000586058 DMRTA2Q96SC8 542 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 C1QTNF6Q9BXI9 259 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 OR2J1Q9GZK6 312 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 SRRQ9GZT4 340 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 MIXL1Q9H2W2 232 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 CNTD2Q9H8S5 307 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 KCNJ16Q9NPI9 418 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 IFT46Q9NQC8 304 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 MRPL15Q9P015 296 aaKnown RBP5.34□□□□□ -1.55
LIG3-206ENST00000586058 OR5V1Q9UGF6 321 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 POLDIP2Q9Y2S7 368 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 STARD10Q9Y365 291 aa5.34□□□□□ -1.55
LIG3-206ENST00000586058 RAI1Q7Z5J4 1906 aaPredicted RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 A0A0B4J203 849 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 A0A0G2JMP0 313 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 A0A0X1KG70 313 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 TMEM272A0A1B0GTI8 110 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 TMEM210A6NLX4 147 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 IQCF6A8MYZ5 107 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 TRAPPC2LH3BP13 241 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 GABARAPH6UMI1 98 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 CTDSPLO15194 276 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 XRCC3O43542 346 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 HTR3BO95264 441 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 NGFP01138 241 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 CHRM2P08172 466 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 CSF1P09603 554 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 GTF2F2P13984 249 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 MGMTP16455 207 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 TNFSF4P23510 183 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 CDK2P24941 298 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 ACKR3P25106 362 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 PRSS3P35030 304 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 RCVRNP35243 200 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 WNT5AP41221 380 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 PTGFRP43088 359 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 OR3A4PP47883 348 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 MMP15P51511 669 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 GPM6AP51674 278 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 TAS2R20P59543 309 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 GNG2P59768 71 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 SORDQ00796 357 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 TAGLNQ01995 201 aaKnown RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 SSBP1Q04837 148 aaKnown RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 MADCAM1Q13477 382 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 HLXQ14774 488 aaPredicted RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 UBE2V2Q15819 145 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 ZNF79Q15937 498 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 NKPD1Q17RQ9 610 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 RSPO1Q2MKA7 263 aaPredicted RBP5.33□□□□□ -1.56
LIG3-206ENST00000586058 CEACAM21Q3KPI0 293 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 SLC22A6Q4U2R8 563 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 C4orf17Q53FE4 359 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 TMEM42Q69YG0 159 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 SLC22A25Q6T423 547 aa5.33□□□□□ -1.56
LIG3-206ENST00000586058 CDH24Q86UP0 819 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms