RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 FAM76BQ5HYJ3 339 aa13.75□□□□□ -0.21
SS18-226ENST00000585241 SPERTQ8NA61 448 aa13.75□□□□□ -0.21
SS18-226ENST00000585241 BORCS8Q96FH0 119 aa13.75□□□□□ -0.21
SS18-226ENST00000585241 CPNE2Q96FN4 548 aaPredicted RBP13.75□□□□□ -0.21
SS18-226ENST00000585241 ADAT1Q9BUB4 502 aaKnown RBP13.75□□□□□ -0.21
SS18-226ENST00000585241 TAAR3PQ9P1P4 343 aa13.75□□□□□ -0.21
SS18-226ENST00000585241 PKDREJQ9NTG1 2253 aa13.75□□□□□ -0.21
SS18-226ENST00000585241 A0A075B6Q4 140 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 IGKV1-27A0A075B6S5 117 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 ZSCAN5BA6NJL1 495 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 B9A039 149 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 PTBP3O95758 552 aaKnown RBP13.74□□□□□ -0.21
SS18-226ENST00000585241 ZNF93P35789 620 aaPredicted RBP13.74□□□□□ -0.21
SS18-226ENST00000585241 RBP2P50120 134 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 SCAND1P57086 179 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 ZP1P60852 638 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 GNG3P63215 75 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 KISS1Q15726 138 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 MST1LQ2TV78 715 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 NPRL2Q8WTW4 380 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 SORCS2Q96PQ0 1159 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 HIST1H2AAQ96QV6 131 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 MICU1Q9BPX6 476 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 MRI1Q9BV20 369 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 RTL8AQ9BWD3 113 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 ICE1Q9Y2F5 2266 aa13.74□□□□□ -0.21
SS18-226ENST00000585241 HELZ2Q9BYK8 2649 aaKnown RBP13.73□□□□□ -0.21
SS18-226ENST00000585241 RAI1Q7Z5J4 1906 aaPredicted RBP13.73□□□□□ -0.21
SS18-226ENST00000585241 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.73□□□□□ -0.21
SS18-226ENST00000585241 PLSCR5A0PG75 271 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 TMEM210A6NLX4 147 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 HS3ST1O14792 307 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 OCMP0CE72 109 aaPredicted RBP13.73□□□□□ -0.21
SS18-226ENST00000585241 CD200P41217 278 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 ALDH3B1P43353 468 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 RANBP1P43487 201 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 ATP1B3P54709 279 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 OR8G1Q15617 311 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 SWI5Q1ZZU3 235 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 ZNF404Q494X3 552 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 DMRTC1Q5HYR2 192 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 JAGN1Q8N5M9 183 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 TRMT10AQ8TBZ6 339 aaKnown RBP13.73□□□□□ -0.21
SS18-226ENST00000585241 ACOT12Q8WYK0 555 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 AP3S1Q92572 193 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 DVL3Q92997 716 aaPredicted RBP13.73□□□□□ -0.21
SS18-226ENST00000585241 FBXW5Q969U6 566 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 RNF170Q96K19 258 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 SPACA5Q96QH8 159 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 CNTD2Q9H8S5 307 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 MSL2Q9HCI7 577 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 ABRACLQ9P1F3 81 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 STEAP1Q9UHE8 339 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 COL12A1Q99715 3063 aa13.73□□□□□ -0.21
SS18-226ENST00000585241 FAM230AA0A1W2PPH8 454 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 ZNF732B4DXR9 585 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 H0YL77 283 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 M0R233 179 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 CALCBP10092 127 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 SLC2A2P11168 524 aaPredicted RBP13.72□□□□□ -0.21
SS18-226ENST00000585241 NAT2P11245 290 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 HTR2CP28335 458 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 MTCP1P56278 107 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 MZT1Q08AG7 82 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 RAB11BQ15907 218 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 NKPD1Q17RQ9 610 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 HES5Q5TA89 166 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 ASCL4Q6XD76 172 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 WDR86Q86TI4 376 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 DTX2Q86UW9 622 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 MUC15Q8N387 334 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 CELF2-AS1Q8N7Q2 184 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 OR4D6Q8NGJ1 314 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 OR8S1Q8NH09 359 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 GTF3AQ92664 365 aaKnown RBP13.72□□□□□ -0.21
SS18-226ENST00000585241 C1orf147Q96MC9 270 aaPredicted RBP13.72□□□□□ -0.21
SS18-226ENST00000585241 DIRC2Q96SL1 478 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 TLNRD1Q9H1K6 362 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 CXXC4Q9H2H0 198 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 MMP27Q9H306 513 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 OR51I2Q9H344 312 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 PLGRKTQ9HBL7 147 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 DAPK2Q9UIK4 370 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 ZDHHC8Q9ULC8 765 aa13.72□□□□□ -0.21
SS18-226ENST00000585241 A1L4Q6 167 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 LRP5LA4QPB2 252 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 CTAG2O75638 210 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 CD55P08174 381 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 MPZP25189 248 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 OR3A4PP47883 348 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 ZNF81P51508 661 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 GPM6AP51674 278 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 CAPZA1P52907 286 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 TLE4Q04727 773 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 MAB21L1Q13394 359 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 IDNKQ5T6J7 187 aa13.71□□□□□ -0.21
SS18-226ENST00000585241 SP5Q6BEB4 398 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms