RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PBOV1Q9GZY1 135 aa13.13□□□□□ -0.31
CDK5RAP3-236ENST00000584991 KCNK15Q9H427 330 aa13.13□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CNTD2Q9H8S5 307 aa13.13□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TP53TG5Q9Y2B4 290 aa13.13□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PTPRQQ9UMZ3 2332 aa13.13□□□□□ -0.31
CDK5RAP3-236ENST00000584991 IGKV1D-43A0A0B4J1Z2 117 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 P2RY10O00398 339 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 IGHG1P01857 330 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 GSTP1P09211 210 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PGA4P0DJD7 388 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PGA3P0DJD8 388 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 KCNMB1Q16558 191 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ACTBL2Q562R1 376 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ABLIM2Q6H8Q1 611 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 C11orf87Q6NUJ2 197 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PAQR4Q8N4S7 273 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 NOXO1Q8NFA2 376 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 LHFPL5Q8TAF8 219 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 C11orf40Q8WZ69 217 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 FGGYQ96C11 551 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 WDYHV1Q96HA8 205 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PHB2Q99623 299 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CENPMQ9NSP4 180 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TNFSF18Q9UNG2 199 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TRAV14DV4A0A0A6YYC5 116 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 KANTRA0A1W2PQU2 76 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ZNF716A6NP11 495 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ZNF878C9JN71 531 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 M0QYG6 137 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CYTIPO60759 359 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 NR2C1P13056 603 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PLEKHN1Q494U1 663 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CDNFQ49AH0 187 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 UNQ6494/PRO21346Q6UXR6 183 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ACOT7LQ6ZUV0 252 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 FJX1Q86VR8 437 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 SLC38A6Q8IZM9 456 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ZIC4Q8N9L1 334 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 OR1S1Q8NH92 325 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PCNPQ8WW12 178 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 LUZP4Q9P127 313 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TMEM235A6NFC5 223 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TMEM14DPA8MWL7 114 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 SYNGR4O95473 234 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 NAT1P18440 290 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CYCSP99999 105 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PNLIPRP3Q17RR3 467 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 MOGAT2Q3SYC2 334 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 OTPQ5XKR4 325 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 LINC00346Q8IVM7 164 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 STPG2Q8N412 459 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 OR1J2Q8NGS2 313 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 OR10R2Q8NGX6 335 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 OR2AJ1Q8NGZ0 328 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ABHD3Q8WU67 409 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ST8SIA2Q92186 375 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 RASL12Q9NYN1 266 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ANAPC10Q9UM13 185 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 NOP16Q9Y3C1 178 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CEACAM18A8MTB9 384 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 DUS4LO95620 317 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TUSC1Q2TAM9 212 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 SCGB2B2Q4G0G5 96 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 MOB3CQ70IA8 216 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 TRAPPC6BQ86SZ2 158 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PXT1Q8NFP0 134 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 KCNG3Q8TAE7 436 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 FNDC9Q8TBE3 224 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CXorf58Q96LI9 332 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 SCGB3A2Q96PL1 93 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 IFT46Q9NQC8 304 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ZNF71Q9NQZ8 489 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 MCTS1Q9ULC4 181 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 IGF2RP11717 2491 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ANKRD11Q6UB99 2663 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ZNHIT1O43257 154 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 BCL2L11O43521 198 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 VSIG8P0DPA2 414 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CCL1P22362 96 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ZNF93P35789 620 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 GNALP38405 381 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CBX5P45973 191 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 IL13RA1P78552 427 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 UNC119Q13432 240 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 RPUSD3Q6P087 351 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CCDC36Q8IYA8 594 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ARRDC1Q8N5I2 433 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 ZCCHC14Q8WYQ9 949 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 LINC00052Q96N35 136 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 PRRG4Q9BZD6 226 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 GHRLQ9UBU3 117 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 VSIG4Q9Y279 399 aa13.1□□□□□ -0.31
CDK5RAP3-236ENST00000584991 CACNA1GO43497 2377 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 A0A0B4J2A0 478 aa13.09□□□□□ -0.31
CDK5RAP3-236ENST00000584991 IFNA6P05013 189 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms