RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 STEAP1BQ6NZ63 245 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 MARCH1Q8TCQ1 289 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 PNPLA2Q96AD5 504 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 HS3ST6Q96QI5 342 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 MED18Q9BUE0 208 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 MRPL13Q9BYD1 178 aaKnown RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 PARP12Q9H0J9 701 aaKnown RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 FAM206AQ9NX38 181 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 DOPEY2Q9Y3R5 2298 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 ERVH48-1M5A8F1 160 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 PSMB1P20618 241 aaKnown RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 NFYAP23511 347 aaPredicted RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 NUBP1P53384 320 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 TAGLNQ01995 201 aaKnown RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 C2orf68Q2NKX9 166 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 SLC38A6Q8IZM9 456 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 SGK3Q96BR1 496 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 SLCO5A1Q9H2Y9 848 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 ZNF703Q9H7S9 590 aaPredicted RBP8.98□□□□□ -0.97
RFFL-212ENST00000584655 GPR35Q9HC97 309 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 SPRR3Q9UBC9 169 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 SLC23A1Q9UHI7 598 aa8.98□□□□□ -0.97
RFFL-212ENST00000584655 GJE1A6NN92 205 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 SIGLEC5O15389 551 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 DNASE1P24855 282 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 LIMK1P53667 647 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 ASAH1Q13510 395 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 ZNF684Q5T5D7 378 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 ZNF826PQ6ZT77 177 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 SLC43A2Q8N370 569 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 FADS6Q8N9I5 356 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 LYZL4Q96KX0 146 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 SNX18Q96RF0 628 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 ISYNA1Q9NPH2 558 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 OR2S2Q9NQN1 319 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 IGKV1-9A0A0C4DH69 117 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 SLC17A2O00624 439 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 ZNF35P13682 527 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 ZNF44P15621 663 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 MGMTP16455 207 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 ZNF83P51522 516 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 P2RY4P51582 365 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 S100A10P60903 97 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 MEX3BQ6ZN04 569 aaKnown RBP8.97□□□□□ -0.97
RFFL-212ENST00000584655 OR11H7Q8NGC8 314 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 OR51F2Q8NH61 342 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 OR1F12Q8NHA8 337 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 COQ8AQ8NI60 647 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 OR10A2Q9H208 303 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 POFUT1Q9H488 388 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 EHFQ9NZC4 300 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 RAB27BO00194 218 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 GEMIN2O14893 280 aaKnown RBP8.97□□□□□ -0.97
RFFL-212ENST00000584655 HOXC12P31275 282 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 PTGS2P35354 604 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 BDH1Q02338 343 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 OR2B11Q5JQS5 317 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 SLC25A47Q6Q0C1 308 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 OR4K15Q8NH41 348 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 HAVCR1Q96D42 359 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 FAM234AQ9H0X4 552 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 ZCCHC4Q9H5U6 513 aa8.97□□□□□ -0.97
RFFL-212ENST00000584655 TRAV1-2A0A0B4J238 106 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 PHYHO14832 338 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 HLA-AP01891 365 aaKnown RBP8.96□□□□□ -0.97
RFFL-212ENST00000584655 ERP29P30040 261 aaKnown RBP8.96□□□□□ -0.97
RFFL-212ENST00000584655 ASCL1P50553 236 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 SUMO3P55854 103 aaPredicted RBP8.96□□□□□ -0.97
RFFL-212ENST00000584655 UNC119Q13432 240 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 BCL2A1Q16548 175 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 HAVCR2Q8TDQ0 301 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 OBP2BQ9NPH6 170 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 TINAGQ9UJW2 476 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 F8VVB4 439 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 F8VWA3 439 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 ALX3O95076 343 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 PDGFAP04085 211 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 UBCP0CG48 685 aaKnown RBP8.96□□□□□ -0.97
RFFL-212ENST00000584655 MMP15P51511 669 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 RPS16P62249 146 aaKnown RBP8.96□□□□□ -0.97
RFFL-212ENST00000584655 SORDQ00796 357 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 ADGRE4PQ86SQ3 457 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 SEMA6DQ8NFY4 1073 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 SORCS2Q96PQ0 1159 aa8.96□□□□□ -0.97
RFFL-212ENST00000584655 COL4A2P08572 1712 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 SC5DO75845 299 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 SPDEFO95238 335 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 CSRP2Q16527 193 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 PDSS1Q5T2R2 415 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 ZNF454Q8N9F8 522 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 SMIM4Q8WVI0 70 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 ELMOD3Q96FG2 381 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 HIST1H2AAQ96QV6 131 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 SMIM3Q9BZL3 60 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 C12orf4Q9NQ89 552 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 KCNK7Q9Y2U2 307 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 NCKAP5O14513 1909 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 SLC22A5O76082 557 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 NRASP01111 189 aa8.96□□□□□ -0.98
RFFL-212ENST00000584655 CD63P08962 238 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms