RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	TFF1	P04155	84 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	RNASE1	P07998	156 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CXCR4	P61073	352 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ROM1	Q03395	351 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MFGE8	Q08431	387 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	AADACL4	Q5VUY2	407 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	NXNL2	Q5VZ03	156 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	KDM4D	Q6B0I6	523 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MOB3C	Q70IA8	216 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SLC35F2	Q8IXU6	374 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CIB1	Q99828	191 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ONECUT1	Q9UBC0	465 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PIGL	Q9Y2B2	252 aa		11.27	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CENPVL3	A0A0U1RRI6	287 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	NKX6-3	A6NJ46	265 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SLC22A31	A6NKX4	558 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZNF670-ZNF695	F2Z2N8	137 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	FCGR1A	P12314	374 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SELL	P14151	372 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MMP9	P14780	707 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	FAH	P16930	419 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	BPIFB3	P59826	476 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GNG3	P63215	75 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	RIPPLY1	Q0D2K3	151 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PDCD1	Q15116	288 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	LRRC10	Q5BKY1	277 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	BCL2L15	Q5TBC7	163 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PLCXD3	Q63HM9	321 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	C12orf73	Q69YU5	71 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	STUM	Q69YW2	141 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PLEKHG7	Q6ZR37	379 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR51G2	Q8NGK0	314 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR10Z1	Q8NGY1	313 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GATAD2B	Q8WXI9	593 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	H1FX	Q92522	213 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	C12orf43	Q96C57	262 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	TBX5	Q99593	518 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GABARAPL1	Q9H0R8	117 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SIRPD	Q9H106	197 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	RIBC2	Q9H4K1	309 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CNTD2	Q9H8S5	307 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ADGRL4	Q9HBW9	690 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ENOPH1	Q9UHY7	261 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PCDHGB1	Q9Y5G3	927 aa		11.26	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	IGHV1-69D	A0A0B4J2H0	117 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	LOC110117498-PIK3R3	F6TDL0	507 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CLDN34	H7C241	214 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	RHBDL1	O75783	438 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	APOL3	O95236	402 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	IGHV1-69	P01742	117 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	AMY2B	P19961	511 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GLRA1	P23415	457 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	DCTD	P32321	178 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	POLR2I	P36954	125 aa	Known RBP	11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GABRA2	P47869	451 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ACTR3	P61158	418 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	EFNB1	P98172	346 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CEACAM21	Q3KPI0	293 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CDON	Q4KMG0	1287 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	FAM76B	Q5HYJ3	339 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	VMO1	Q7Z5L0	202 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GID4	Q8IVV7	300 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR51I2	Q9H344	312 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CLN6	Q9NWW5	311 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	NUFIP1	Q9UHK0	495 aa	Known RBP	11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ENPP5	Q9UJA9	477 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OAZ3	Q9UMX2	235 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		R4GMQ9	66 aa		11.25	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186		A6NIN4	97 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SAC3D1	A6NKF1	404 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OR2AT4	A6NND4	320 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MTRF1	O75570	445 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	DHRS3	O75911	302 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	RPP14	O95059	124 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	NRAS	P01111	189 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	TTR	P02766	147 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ATP6V1B1	P15313	513 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	NDUFB7	P17568	137 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	OMG	P23515	440 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ATP6V1E1	P36543	226 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	TGM4	P49221	684 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	IL13RA1	P78552	427 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	PRB3	Q04118	309 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	DGUOK	Q16854	277 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	C11orf91	Q3C1V1	193 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	C16orf87	Q6PH81	154 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	HAGHL	Q6PII5	290 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ZNF671	Q8TAW3	534 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	TMIGD2	Q96BF3	282 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	DUS3L	Q96G46	650 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	CENPN	Q96H22	339 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MED30	Q96HR3	178 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	GAFA1	Q96PS6	74 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	MNT	Q99583	582 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	ACOXL	Q9NUZ1	547 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	NLK	Q9UBE8	527 aa		11.24	□□□□□ -0.61
CDK5RAP3-233	ENST00000584186	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms